Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSP1P33241 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.04■□□□□ 0.8
LSP1P33241 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.04■□□□□ 0.8
LSP1P33241 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSP1P33241 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSP1P33241 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSP1P33241 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSP1P33241 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LSP1P33241 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LSP1P33241 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LSP1P33241 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSP1P33241 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LSP1P33241 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSP1P33241 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSP1P33241 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.03■□□□□ 0.8
LSP1P33241 AC009237.3-201ENST00000393279 1427 ntBASIC20.03■□□□□ 0.8
LSP1P33241 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LSP1P33241 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSP1P33241 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSP1P33241 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.03■□□□□ 0.8
LSP1P33241 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LSP1P33241 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSP1P33241 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LSP1P33241 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSP1P33241 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSP1P33241 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
LSP1P33241 AC061975.6-201ENST00000579045 1553 ntBASIC20.03■□□□□ 0.8
LSP1P33241 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSP1P33241 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LSP1P33241 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.03■□□□□ 0.8
LSP1P33241 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.03■□□□□ 0.8
LSP1P33241 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LSP1P33241 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LSP1P33241 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LSP1P33241 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LSP1P33241 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSP1P33241 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSP1P33241 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.02■□□□□ 0.8
LSP1P33241 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.02■□□□□ 0.8
LSP1P33241 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.02■□□□□ 0.8
LSP1P33241 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSP1P33241 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LSP1P33241 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LSP1P33241 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.02■□□□□ 0.79
LSP1P33241 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LSP1P33241 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LSP1P33241 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
LSP1P33241 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.02■□□□□ 0.79
LSP1P33241 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
LSP1P33241 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LSP1P33241 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSP1P33241 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.01■□□□□ 0.79
LSP1P33241 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSP1P33241 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSP1P33241 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
LSP1P33241 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSP1P33241 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.01■□□□□ 0.79
LSP1P33241 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSP1P33241 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSP1P33241 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.01■□□□□ 0.79
LSP1P33241 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LSP1P33241 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LSP1P33241 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
LSP1P33241 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.01■□□□□ 0.79
LSP1P33241 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.01■□□□□ 0.79
LSP1P33241 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.01■□□□□ 0.79
LSP1P33241 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.01■□□□□ 0.79
LSP1P33241 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSP1P33241 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.01■□□□□ 0.79
LSP1P33241 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
LSP1P33241 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSP1P33241 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.01■□□□□ 0.79
LSP1P33241 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSP1P33241 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSP1P33241 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSP1P33241 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LSP1P33241 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
LSP1P33241 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSP1P33241 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20■□□□□ 0.79
LSP1P33241 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSP1P33241 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
LSP1P33241 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSP1P33241 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSP1P33241 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20■□□□□ 0.79
LSP1P33241 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LSP1P33241 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20■□□□□ 0.79
LSP1P33241 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSP1P33241 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSP1P33241 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
LSP1P33241 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20■□□□□ 0.79
LSP1P33241 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20■□□□□ 0.79
LSP1P33241 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20■□□□□ 0.79
LSP1P33241 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20■□□□□ 0.79
LSP1P33241 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20■□□□□ 0.79
LSP1P33241 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSP1P33241 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20■□□□□ 0.79
LSP1P33241 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20■□□□□ 0.79
LSP1P33241 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSP1P33241 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSP1P33241 AC020763.4-201ENST00000623414 4170 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms