Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3BP20337 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB3BP20337 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.48■□□□□ 0.39
RAB3BP20337 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB3BP20337 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAB3BP20337 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.48■□□□□ 0.39
RAB3BP20337 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB3BP20337 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3BP20337 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3BP20337 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RAB3BP20337 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB3BP20337 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3BP20337 AC020763.4-201ENST00000623414 4170 ntBASIC17.47■□□□□ 0.39
RAB3BP20337 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3BP20337 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3BP20337 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3BP20337 UNC93B3-201ENST00000308076 687 ntBASIC17.47■□□□□ 0.39
RAB3BP20337 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3BP20337 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RAB3BP20337 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RAB3BP20337 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB3BP20337 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB3BP20337 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3BP20337 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3BP20337 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3BP20337 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3BP20337 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3BP20337 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3BP20337 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3BP20337 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3BP20337 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3BP20337 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RAB3BP20337 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RAB3BP20337 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB3BP20337 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB3BP20337 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB3BP20337 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.46■□□□□ 0.39
RAB3BP20337 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3BP20337 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3BP20337 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3BP20337 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3BP20337 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3BP20337 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RAB3BP20337 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3BP20337 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3BP20337 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3BP20337 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
RAB3BP20337 AC008764.7-201ENST00000593779 1081 ntBASIC17.46■□□□□ 0.39
RAB3BP20337 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3BP20337 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB3BP20337 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB3BP20337 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB3BP20337 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3BP20337 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3BP20337 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3BP20337 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RAB3BP20337 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
RAB3BP20337 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAB3BP20337 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB3BP20337 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3BP20337 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3BP20337 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RAB3BP20337 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3BP20337 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB3BP20337 NEFHP1-201ENST00000412845 2629 ntBASIC17.45■□□□□ 0.38
RAB3BP20337 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB3BP20337 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAB3BP20337 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3BP20337 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3BP20337 MIR572-201ENST00000384983 95 ntBASIC17.45■□□□□ 0.38
RAB3BP20337 AL356441.2-201ENST00000443009 864 ntBASIC17.45■□□□□ 0.38
RAB3BP20337 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3BP20337 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB3BP20337 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3BP20337 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB3BP20337 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB3BP20337 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3BP20337 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3BP20337 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3BP20337 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB3BP20337 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB3BP20337 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB3BP20337 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3BP20337 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3BP20337 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB3BP20337 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB3BP20337 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3BP20337 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms