Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 AP004607.4-201ENST00000530158 1459 ntBASIC17.8■□□□□ 0.44
CDRT1O95170 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.8■□□□□ 0.44
CDRT1O95170 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.8■□□□□ 0.44
CDRT1O95170 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.79■□□□□ 0.44
CDRT1O95170 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.79■□□□□ 0.44
CDRT1O95170 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.79■□□□□ 0.44
CDRT1O95170 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.79■□□□□ 0.44
CDRT1O95170 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.79■□□□□ 0.44
CDRT1O95170 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.79■□□□□ 0.44
CDRT1O95170 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.79■□□□□ 0.44
CDRT1O95170 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.79■□□□□ 0.44
CDRT1O95170 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.79■□□□□ 0.44
CDRT1O95170 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.79■□□□□ 0.44
CDRT1O95170 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.79■□□□□ 0.44
CDRT1O95170 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDRT1O95170 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDRT1O95170 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
CDRT1O95170 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.78■□□□□ 0.44
CDRT1O95170 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDRT1O95170 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDRT1O95170 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CDRT1O95170 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDRT1O95170 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDRT1O95170 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDRT1O95170 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDRT1O95170 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CDRT1O95170 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDRT1O95170 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.78■□□□□ 0.44
CDRT1O95170 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDRT1O95170 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CDRT1O95170 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDRT1O95170 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.78■□□□□ 0.44
CDRT1O95170 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDRT1O95170 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDRT1O95170 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.77■□□□□ 0.44
CDRT1O95170 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDRT1O95170 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDRT1O95170 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.77■□□□□ 0.44
CDRT1O95170 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDRT1O95170 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDRT1O95170 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDRT1O95170 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDRT1O95170 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDRT1O95170 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDRT1O95170 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CDRT1O95170 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDRT1O95170 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDRT1O95170 AP001330.3-201ENST00000520123 633 ntBASIC17.77■□□□□ 0.44
CDRT1O95170 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDRT1O95170 MIR2861-201ENST00000636310 90 ntBASIC17.77■□□□□ 0.44
CDRT1O95170 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDRT1O95170 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDRT1O95170 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.77■□□□□ 0.43
CDRT1O95170 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.77■□□□□ 0.43
CDRT1O95170 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.43
CDRT1O95170 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDRT1O95170 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDRT1O95170 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.76■□□□□ 0.43
CDRT1O95170 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDRT1O95170 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDRT1O95170 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.76■□□□□ 0.43
CDRT1O95170 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDRT1O95170 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.76■□□□□ 0.43
CDRT1O95170 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDRT1O95170 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDRT1O95170 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDRT1O95170 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDRT1O95170 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDRT1O95170 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDRT1O95170 AC007613.1-201ENST00000572811 2597 ntBASIC17.76■□□□□ 0.43
CDRT1O95170 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.76■□□□□ 0.43
CDRT1O95170 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.76■□□□□ 0.43
CDRT1O95170 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.76■□□□□ 0.43
CDRT1O95170 AC106739.1-201ENST00000617035 715 ntBASIC17.76■□□□□ 0.43
CDRT1O95170 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.76■□□□□ 0.43
CDRT1O95170 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.76■□□□□ 0.43
CDRT1O95170 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDRT1O95170 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDRT1O95170 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDRT1O95170 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDRT1O95170 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDRT1O95170 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.76■□□□□ 0.43
CDRT1O95170 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms