Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RBFOX3A6NFN3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 AC055733.4-201ENST00000638462 1354 ntBASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 AC135050.7-201ENST00000624508 2218 ntBASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 OR2I1P-207ENST00000453522 948 ntBASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 AL133373.2-201ENST00000623187 2828 ntBASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.78■□□□□ 0.12
RBFOX3A6NFN3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 AC009113.1-201ENST00000570267 2443 ntBASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 CROCCP3-202ENST00000420820 1947 ntBASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RBFOX3A6NFN3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RBFOX3A6NFN3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RBFOX3A6NFN3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RBFOX3A6NFN3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.77■□□□□ 0.11
RBFOX3A6NFN3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RBFOX3A6NFN3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.77■□□□□ 0.11
RBFOX3A6NFN3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RBFOX3A6NFN3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 MIR4508-201ENST00000584178 70 ntBASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RBFOX3A6NFN3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms