Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC66A2RUB6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 IRS3P-201ENST00000223076 1006 ntBASIC21.53■■□□□ 1.04
CCDC66A2RUB6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 AC027612.3-201ENST00000413684 1047 ntBASIC21.53■■□□□ 1.04
CCDC66A2RUB6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC66A2RUB6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 AC010141.2-201ENST00000452426 721 ntBASIC21.52■■□□□ 1.04
CCDC66A2RUB6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC66A2RUB6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC66A2RUB6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC66A2RUB6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 AC092720.2-201ENST00000602388 1665 ntBASIC21.51■■□□□ 1.03
CCDC66A2RUB6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC66A2RUB6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC66A2RUB6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.5■■□□□ 1.03
CCDC66A2RUB6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC66A2RUB6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC66A2RUB6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC66A2RUB6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCDC66A2RUB6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC66A2RUB6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.5■■□□□ 1.03
CCDC66A2RUB6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCDC66A2RUB6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC66A2RUB6 FZD10-202ENST00000539839 3282 ntBASIC21.5■■□□□ 1.03
CCDC66A2RUB6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC66A2RUB6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC66A2RUB6 NOC2LP1-202ENST00000452600 2235 ntBASIC21.49■■□□□ 1.03
CCDC66A2RUB6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 HCG11-201ENST00000411553 5696 ntBASIC21.49■■□□□ 1.03
CCDC66A2RUB6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms