Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB7Q9Y5E2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHB7Q9Y5E2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB7Q9Y5E2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB7Q9Y5E2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PCDHB7Q9Y5E2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 RCN1P1-201ENST00000400413 996 ntBASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 NUDT16P1-203ENST00000513809 620 ntBASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB7Q9Y5E2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB7Q9Y5E2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 KRT8P17-201ENST00000453110 1448 ntBASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB7Q9Y5E2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 UNC93B2-201ENST00000285383 730 ntBASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 AL121603.2-201ENST00000557373 2117 ntBASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 AC012676.1-201ENST00000574705 1949 ntBASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB7Q9Y5E2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 RBM17P1-201ENST00000453646 1190 ntBASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 REXO1L10P-201ENST00000615707 1290 ntBASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 CR392000.1-201ENST00000624770 1228 ntBASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms