Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.5■□□□□ 0.87
SP110Q9HB58 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 KRT8P20-201ENST00000423953 1409 ntBASIC20.5■□□□□ 0.87
SP110Q9HB58 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 AC092368.3-202ENST00000574180 1591 ntBASIC20.5■□□□□ 0.87
SP110Q9HB58 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.5■□□□□ 0.87
SP110Q9HB58 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SP110Q9HB58 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SP110Q9HB58 AL162377.1-201ENST00000618844 1793 ntBASIC20.49■□□□□ 0.87
SP110Q9HB58 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SP110Q9HB58 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SP110Q9HB58 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SP110Q9HB58 AL390719.1-204ENST00000412397 1219 ntBASIC20.49■□□□□ 0.87
SP110Q9HB58 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.49■□□□□ 0.87
SP110Q9HB58 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.49■□□□□ 0.87
SP110Q9HB58 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SP110Q9HB58 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SP110Q9HB58 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SP110Q9HB58 KRT8P17-201ENST00000453110 1448 ntBASIC20.49■□□□□ 0.87
SP110Q9HB58 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SP110Q9HB58 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
SP110Q9HB58 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SP110Q9HB58 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SP110Q9HB58 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SP110Q9HB58 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.49■□□□□ 0.87
SP110Q9HB58 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SP110Q9HB58 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.49■□□□□ 0.87
SP110Q9HB58 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.49■□□□□ 0.87
SP110Q9HB58 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SP110Q9HB58 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SP110Q9HB58 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SP110Q9HB58 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SP110Q9HB58 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SP110Q9HB58 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.48■□□□□ 0.87
SP110Q9HB58 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SP110Q9HB58 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SP110Q9HB58 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SP110Q9HB58 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SP110Q9HB58 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.48■□□□□ 0.87
SP110Q9HB58 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.48■□□□□ 0.87
SP110Q9HB58 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.48■□□□□ 0.87
SP110Q9HB58 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.48■□□□□ 0.87
SP110Q9HB58 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SP110Q9HB58 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.48■□□□□ 0.87
SP110Q9HB58 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.48■□□□□ 0.87
SP110Q9HB58 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.48■□□□□ 0.87
SP110Q9HB58 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SP110Q9HB58 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SP110Q9HB58 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP110Q9HB58 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.47■□□□□ 0.87
SP110Q9HB58 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP110Q9HB58 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP110Q9HB58 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP110Q9HB58 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP110Q9HB58 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.47■□□□□ 0.87
SP110Q9HB58 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP110Q9HB58 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.47■□□□□ 0.87
SP110Q9HB58 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP110Q9HB58 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP110Q9HB58 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.47■□□□□ 0.87
SP110Q9HB58 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
SP110Q9HB58 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
SP110Q9HB58 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP110Q9HB58 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP110Q9HB58 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP110Q9HB58 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP110Q9HB58 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP110Q9HB58 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.47■□□□□ 0.87
SP110Q9HB58 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.47■□□□□ 0.87
SP110Q9HB58 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SP110Q9HB58 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SP110Q9HB58 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SP110Q9HB58 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SP110Q9HB58 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.46■□□□□ 0.87
SP110Q9HB58 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.46■□□□□ 0.87
SP110Q9HB58 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SP110Q9HB58 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SP110Q9HB58 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SP110Q9HB58 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.46■□□□□ 0.87
SP110Q9HB58 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.46■□□□□ 0.87
SP110Q9HB58 RNA5SP413-201ENST00000516373 109 ntBASIC20.46■□□□□ 0.87
SP110Q9HB58 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.46■□□□□ 0.87
SP110Q9HB58 PNMA6B-201ENST00000538162 1200 ntBASIC20.46■□□□□ 0.87
SP110Q9HB58 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.46■□□□□ 0.87
SP110Q9HB58 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SP110Q9HB58 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SP110Q9HB58 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.46■□□□□ 0.87
SP110Q9HB58 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
SP110Q9HB58 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SP110Q9HB58 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SP110Q9HB58 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SP110Q9HB58 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SP110Q9HB58 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.46■□□□□ 0.87
SP110Q9HB58 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.45■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms