Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NBPF3Q9H094 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NBPF3Q9H094 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.81■■□□□ 1.4
NBPF3Q9H094 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF3Q9H094 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.8■■□□□ 1.4
NBPF3Q9H094 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF3Q9H094 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF3Q9H094 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NBPF3Q9H094 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.8■■□□□ 1.4
NBPF3Q9H094 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF3Q9H094 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.8■■□□□ 1.4
NBPF3Q9H094 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF3Q9H094 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.8■■□□□ 1.4
NBPF3Q9H094 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.8■■□□□ 1.4
NBPF3Q9H094 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF3Q9H094 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NBPF3Q9H094 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.8■■□□□ 1.4
NBPF3Q9H094 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
NBPF3Q9H094 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF3Q9H094 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF3Q9H094 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.8■■□□□ 1.4
NBPF3Q9H094 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF3Q9H094 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF3Q9H094 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF3Q9H094 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF3Q9H094 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.79■■□□□ 1.4
NBPF3Q9H094 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NBPF3Q9H094 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF3Q9H094 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF3Q9H094 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF3Q9H094 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF3Q9H094 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.79■■□□□ 1.4
NBPF3Q9H094 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF3Q9H094 MIR4497-201ENST00000583208 89 ntBASIC23.79■■□□□ 1.4
NBPF3Q9H094 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF3Q9H094 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
NBPF3Q9H094 AC006557.6-201ENST00000623071 864 ntBASIC23.79■■□□□ 1.4
NBPF3Q9H094 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF3Q9H094 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
NBPF3Q9H094 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF3Q9H094 LINC01521-201ENST00000504184 1943 ntBASIC23.78■■□□□ 1.4
NBPF3Q9H094 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF3Q9H094 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.78■■□□□ 1.4
NBPF3Q9H094 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF3Q9H094 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF3Q9H094 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
NBPF3Q9H094 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.78■■□□□ 1.4
NBPF3Q9H094 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.78■■□□□ 1.4
NBPF3Q9H094 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF3Q9H094 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.78■■□□□ 1.4
NBPF3Q9H094 SOX15-203ENST00000570788 1093 ntBASIC23.78■■□□□ 1.4
NBPF3Q9H094 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.78■■□□□ 1.4
NBPF3Q9H094 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.78■■□□□ 1.4
NBPF3Q9H094 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.78■■□□□ 1.4
NBPF3Q9H094 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.78■■□□□ 1.4
NBPF3Q9H094 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.78■■□□□ 1.4
NBPF3Q9H094 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF3Q9H094 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF3Q9H094 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
NBPF3Q9H094 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF3Q9H094 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
NBPF3Q9H094 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
NBPF3Q9H094 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF3Q9H094 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF3Q9H094 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
NBPF3Q9H094 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.77■■□□□ 1.4
NBPF3Q9H094 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF3Q9H094 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF3Q9H094 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF3Q9H094 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.77■■□□□ 1.4
NBPF3Q9H094 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.77■■□□□ 1.4
NBPF3Q9H094 AL031963.3-201ENST00000606441 850 ntBASIC23.77■■□□□ 1.4
NBPF3Q9H094 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF3Q9H094 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF3Q9H094 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.77■■□□□ 1.4
NBPF3Q9H094 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF3Q9H094 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF3Q9H094 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF3Q9H094 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.77■■□□□ 1.4
NBPF3Q9H094 AC099778.1-201ENST00000568593 1911 ntBASIC23.76■■□□□ 1.39
NBPF3Q9H094 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 KRT8P17-201ENST00000453110 1448 ntBASIC23.76■■□□□ 1.39
NBPF3Q9H094 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.76■■□□□ 1.39
NBPF3Q9H094 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.76■■□□□ 1.39
NBPF3Q9H094 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
NBPF3Q9H094 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
NBPF3Q9H094 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.76■■□□□ 1.39
NBPF3Q9H094 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.76■■□□□ 1.39
NBPF3Q9H094 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.76■■□□□ 1.39
NBPF3Q9H094 AC010331.1-201ENST00000611423 582 ntBASIC23.76■■□□□ 1.39
NBPF3Q9H094 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms