Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
LINC00479Q96M42 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00479Q96M42 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00479Q96M42 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00479Q96M42 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00479Q96M42 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.27■□□□□ 0.04
LINC00479Q96M42 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00479Q96M42 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00479Q96M42 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00479Q96M42 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00479Q96M42 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LINC00479Q96M42 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00479Q96M42 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00479Q96M42 AC245052.3-201ENST00000450182 901 ntBASIC15.27■□□□□ 0.04
LINC00479Q96M42 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00479Q96M42 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00479Q96M42 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
LINC00479Q96M42 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00479Q96M42 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.27■□□□□ 0.03
LINC00479Q96M42 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LINC00479Q96M42 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
LINC00479Q96M42 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
LINC00479Q96M42 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.27■□□□□ 0.03
LINC00479Q96M42 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00479Q96M42 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LINC00479Q96M42 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.27■□□□□ 0.03
LINC00479Q96M42 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.27■□□□□ 0.03
LINC00479Q96M42 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00479Q96M42 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00479Q96M42 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00479Q96M42 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00479Q96M42 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.27■□□□□ 0.03
LINC00479Q96M42 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.27■□□□□ 0.03
LINC00479Q96M42 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00479Q96M42 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00479Q96M42 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00479Q96M42 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LINC00479Q96M42 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LINC00479Q96M42 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.26■□□□□ 0.03
LINC00479Q96M42 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00479Q96M42 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00479Q96M42 AC024257.2-201ENST00000549699 147 ntBASIC15.26■□□□□ 0.03
LINC00479Q96M42 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.26■□□□□ 0.03
LINC00479Q96M42 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LINC00479Q96M42 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00479Q96M42 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00479Q96M42 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 AC007613.1-201ENST00000572811 2597 ntBASIC15.25■□□□□ 0.03
LINC00479Q96M42 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC00479Q96M42 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.25■□□□□ 0.03
LINC00479Q96M42 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC00479Q96M42 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.25■□□□□ 0.03
LINC00479Q96M42 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LINC00479Q96M42 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
LINC00479Q96M42 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC00479Q96M42 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LINC00479Q96M42 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00479Q96M42 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC00479Q96M42 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00479Q96M42 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00479Q96M42 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00479Q96M42 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00479Q96M42 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00479Q96M42 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 AC099791.1-201ENST00000416440 715 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms