Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 POM121L13P-201ENST00000422362 380 ntBASIC19.29■□□□□ 0.68
RNF31Q96EP0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF31Q96EP0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.29■□□□□ 0.68
RNF31Q96EP0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF31Q96EP0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RNF31Q96EP0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF31Q96EP0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF31Q96EP0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF31Q96EP0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF31Q96EP0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF31Q96EP0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF31Q96EP0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF31Q96EP0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF31Q96EP0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF31Q96EP0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 SNORA78-201ENST00000459373 127 ntBASIC19.28■□□□□ 0.68
RNF31Q96EP0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF31Q96EP0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF31Q96EP0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF31Q96EP0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF31Q96EP0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF31Q96EP0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF31Q96EP0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RNF31Q96EP0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF31Q96EP0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF31Q96EP0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF31Q96EP0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF31Q96EP0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF31Q96EP0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF31Q96EP0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.27■□□□□ 0.68
RNF31Q96EP0 UBE2SP1-201ENST00000450587 669 ntBASIC19.27■□□□□ 0.68
RNF31Q96EP0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF31Q96EP0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF31Q96EP0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF31Q96EP0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF31Q96EP0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF31Q96EP0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.27■□□□□ 0.67
RNF31Q96EP0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
RNF31Q96EP0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF31Q96EP0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF31Q96EP0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF31Q96EP0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF31Q96EP0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
RNF31Q96EP0 FEM1AP4-201ENST00000443167 1987 ntBASIC19.26■□□□□ 0.67
RNF31Q96EP0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF31Q96EP0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF31Q96EP0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF31Q96EP0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF31Q96EP0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF31Q96EP0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RNF31Q96EP0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF31Q96EP0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RNF31Q96EP0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF31Q96EP0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF31Q96EP0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF31Q96EP0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF31Q96EP0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF31Q96EP0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF31Q96EP0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
RNF31Q96EP0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF31Q96EP0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF31Q96EP0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF31Q96EP0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
RNF31Q96EP0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF31Q96EP0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF31Q96EP0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF31Q96EP0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF31Q96EP0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF31Q96EP0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF31Q96EP0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF31Q96EP0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF31Q96EP0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF31Q96EP0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF31Q96EP0 AC011484.1-201ENST00000377652 1995 ntBASIC19.25■□□□□ 0.67
RNF31Q96EP0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF31Q96EP0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF31Q96EP0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF31Q96EP0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF31Q96EP0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF31Q96EP0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF31Q96EP0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF31Q96EP0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RNF31Q96EP0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF31Q96EP0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF31Q96EP0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF31Q96EP0 AL391422.3-201ENST00000603791 2761 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms