Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40ALP0C0E4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40ALP0C0E4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RAB40ALP0C0E4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 RARRES2P10-201ENST00000564312 460 ntBASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 AC005229.4-201ENST00000610085 2198 ntBASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB40ALP0C0E4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB40ALP0C0E4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB40ALP0C0E4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.89■□□□□ 0.62
RAB40ALP0C0E4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB40ALP0C0E4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.89■□□□□ 0.62
RAB40ALP0C0E4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB40ALP0C0E4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 KRT17P2-201ENST00000300992 1314 ntBASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
RAB40ALP0C0E4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 AL049637.2-201ENST00000641778 930 ntBASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RAB40ALP0C0E4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
RAB40ALP0C0E4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40ALP0C0E4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40ALP0C0E4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40ALP0C0E4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB40ALP0C0E4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RAB40ALP0C0E4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB40ALP0C0E4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB40ALP0C0E4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.87■□□□□ 0.61
RAB40ALP0C0E4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40ALP0C0E4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.87■□□□□ 0.61
RAB40ALP0C0E4 AC073912.3-201ENST00000624414 853 ntBASIC18.87■□□□□ 0.61
RAB40ALP0C0E4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40ALP0C0E4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms