Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN1O95832 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN1O95832 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN1O95832 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN1O95832 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN1O95832 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN1O95832 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN1O95832 UNC93B2-201ENST00000285383 730 ntBASIC17.89■□□□□ 0.45
CLDN1O95832 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.89■□□□□ 0.45
CLDN1O95832 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN1O95832 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN1O95832 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN1O95832 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN1O95832 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN1O95832 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN1O95832 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CLDN1O95832 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN1O95832 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN1O95832 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN1O95832 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN1O95832 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN1O95832 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN1O95832 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CLDN1O95832 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN1O95832 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN1O95832 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN1O95832 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN1O95832 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN1O95832 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.88■□□□□ 0.45
CLDN1O95832 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN1O95832 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN1O95832 AL390719.1-204ENST00000412397 1219 ntBASIC17.88■□□□□ 0.45
CLDN1O95832 TPM4P1-201ENST00000436100 807 ntBASIC17.88■□□□□ 0.45
CLDN1O95832 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN1O95832 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.88■□□□□ 0.45
CLDN1O95832 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN1O95832 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN1O95832 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CLDN1O95832 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN1O95832 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN1O95832 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.88■□□□□ 0.45
CLDN1O95832 CYP2D8P-201ENST00000433633 1490 ntBASIC17.88■□□□□ 0.45
CLDN1O95832 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN1O95832 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CLDN1O95832 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLDN1O95832 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN1O95832 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CLDN1O95832 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN1O95832 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN1O95832 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CLDN1O95832 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN1O95832 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.87■□□□□ 0.45
CLDN1O95832 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN1O95832 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN1O95832 AL353807.1-201ENST00000427475 662 ntBASIC17.87■□□□□ 0.45
CLDN1O95832 SLC25A3P1-201ENST00000443844 931 ntBASIC17.87■□□□□ 0.45
CLDN1O95832 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.87■□□□□ 0.45
CLDN1O95832 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.87■□□□□ 0.45
CLDN1O95832 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLDN1O95832 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.87■□□□□ 0.45
CLDN1O95832 WWOX-216ENST00000569818 525 ntBASIC17.87■□□□□ 0.45
CLDN1O95832 AL031963.3-201ENST00000606441 850 ntBASIC17.87■□□□□ 0.45
CLDN1O95832 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CLDN1O95832 REXO1L10P-201ENST00000615707 1290 ntBASIC17.87■□□□□ 0.45
CLDN1O95832 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CLDN1O95832 KRT18P22-201ENST00000402024 1347 ntBASIC17.87■□□□□ 0.45
CLDN1O95832 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CLDN1O95832 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLDN1O95832 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN1O95832 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
CLDN1O95832 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
CLDN1O95832 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN1O95832 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN1O95832 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN1O95832 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN1O95832 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN1O95832 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN1O95832 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLDN1O95832 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN1O95832 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.86■□□□□ 0.45
CLDN1O95832 KRT16P5-201ENST00000455284 522 ntBASIC17.86■□□□□ 0.45
CLDN1O95832 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.86■□□□□ 0.45
CLDN1O95832 NAPSB-206ENST00000562112 1266 ntBASIC17.86■□□□□ 0.45
CLDN1O95832 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.86■□□□□ 0.45
CLDN1O95832 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN1O95832 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN1O95832 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms