Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX6O95503 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX6O95503 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX6O95503 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.91■□□□□ 0.78
CBX6O95503 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX6O95503 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.91■□□□□ 0.78
CBX6O95503 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX6O95503 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX6O95503 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX6O95503 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.91■□□□□ 0.78
CBX6O95503 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX6O95503 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CBX6O95503 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX6O95503 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX6O95503 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX6O95503 AC011484.1-201ENST00000377652 1995 ntBASIC19.9■□□□□ 0.78
CBX6O95503 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX6O95503 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.9■□□□□ 0.78
CBX6O95503 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX6O95503 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX6O95503 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX6O95503 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX6O95503 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.9■□□□□ 0.78
CBX6O95503 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.9■□□□□ 0.78
CBX6O95503 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CBX6O95503 CROCCP5-201ENST00000436658 830 ntBASIC19.9■□□□□ 0.78
CBX6O95503 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.9■□□□□ 0.78
CBX6O95503 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.9■□□□□ 0.78
CBX6O95503 AL109923.1-201ENST00000618799 583 ntBASIC19.9■□□□□ 0.78
CBX6O95503 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX6O95503 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CBX6O95503 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX6O95503 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CBX6O95503 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.9■□□□□ 0.78
CBX6O95503 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX6O95503 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CBX6O95503 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CBX6O95503 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX6O95503 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
CBX6O95503 AC006970.2-201ENST00000450065 779 ntBASIC19.89■□□□□ 0.77
CBX6O95503 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CBX6O95503 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CBX6O95503 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.89■□□□□ 0.77
CBX6O95503 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.89■□□□□ 0.77
CBX6O95503 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.89■□□□□ 0.77
CBX6O95503 AC004854.2-201ENST00000608450 1441 ntBASIC19.89■□□□□ 0.77
CBX6O95503 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.89■□□□□ 0.77
CBX6O95503 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.89■□□□□ 0.77
CBX6O95503 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
CBX6O95503 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.88■□□□□ 0.77
CBX6O95503 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX6O95503 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.88■□□□□ 0.77
CBX6O95503 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CBX6O95503 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.88■□□□□ 0.77
CBX6O95503 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.88■□□□□ 0.77
CBX6O95503 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX6O95503 AL355802.2-201ENST00000402069 882 ntBASIC19.88■□□□□ 0.77
CBX6O95503 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CBX6O95503 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.88■□□□□ 0.77
CBX6O95503 TMEM191A-211ENST00000637163 1067 ntBASIC19.88■□□□□ 0.77
CBX6O95503 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.88■□□□□ 0.77
CBX6O95503 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CBX6O95503 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CBX6O95503 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CBX6O95503 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX6O95503 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.88■□□□□ 0.77
CBX6O95503 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.87■□□□□ 0.77
CBX6O95503 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX6O95503 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CBX6O95503 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX6O95503 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBX6O95503 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CBX6O95503 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX6O95503 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.87■□□□□ 0.77
CBX6O95503 NCF1B-203ENST00000435988 1254 ntBASIC19.87■□□□□ 0.77
CBX6O95503 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBX6O95503 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.87■□□□□ 0.77
CBX6O95503 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CBX6O95503 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX6O95503 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX6O95503 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.87■□□□□ 0.77
CBX6O95503 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CBX6O95503 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.87■□□□□ 0.77
CBX6O95503 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX6O95503 AC093503.3-201ENST00000624917 2352 ntBASIC19.86■□□□□ 0.77
CBX6O95503 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX6O95503 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX6O95503 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CBX6O95503 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CBX6O95503 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX6O95503 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX6O95503 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX6O95503 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX6O95503 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CBX6O95503 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CBX6O95503 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CBX6O95503 KRT19P1-201ENST00000405746 1186 ntBASIC19.86■□□□□ 0.77
CBX6O95503 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.86■□□□□ 0.77
CBX6O95503 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CBX6O95503 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms