Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDRT1O95170 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDRT1O95170 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDRT1O95170 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDRT1O95170 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDRT1O95170 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDRT1O95170 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDRT1O95170 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.83■□□□□ 0.44
CDRT1O95170 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.83■□□□□ 0.44
CDRT1O95170 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CDRT1O95170 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CDRT1O95170 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDRT1O95170 TREX1-205ENST00000625293 1783 ntBASIC17.83■□□□□ 0.44
CDRT1O95170 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.83■□□□□ 0.44
CDRT1O95170 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.83■□□□□ 0.44
CDRT1O95170 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.83■□□□□ 0.44
CDRT1O95170 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.83■□□□□ 0.44
CDRT1O95170 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDRT1O95170 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CDRT1O95170 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 Z82202.1-201ENST00000623446 1880 ntBASIC17.82■□□□□ 0.44
CDRT1O95170 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.82■□□□□ 0.44
CDRT1O95170 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.82■□□□□ 0.44
CDRT1O95170 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.82■□□□□ 0.44
CDRT1O95170 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDRT1O95170 AC096631.2-201ENST00000436136 790 ntBASIC17.82■□□□□ 0.44
CDRT1O95170 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 PBX2P1-201ENST00000493219 1291 ntBASIC17.82■□□□□ 0.44
CDRT1O95170 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.82■□□□□ 0.44
CDRT1O95170 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.82■□□□□ 0.44
CDRT1O95170 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.82■□□□□ 0.44
CDRT1O95170 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.82■□□□□ 0.44
CDRT1O95170 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.82■□□□□ 0.44
CDRT1O95170 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDRT1O95170 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDRT1O95170 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CDRT1O95170 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDRT1O95170 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CDRT1O95170 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.81■□□□□ 0.44
CDRT1O95170 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDRT1O95170 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDRT1O95170 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDRT1O95170 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CDRT1O95170 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDRT1O95170 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDRT1O95170 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CDRT1O95170 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CDRT1O95170 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDRT1O95170 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.81■□□□□ 0.44
CDRT1O95170 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.81■□□□□ 0.44
CDRT1O95170 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.81■□□□□ 0.44
CDRT1O95170 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.81■□□□□ 0.44
CDRT1O95170 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
CDRT1O95170 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.81■□□□□ 0.44
CDRT1O95170 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.81■□□□□ 0.44
CDRT1O95170 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDRT1O95170 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.81■□□□□ 0.44
CDRT1O95170 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDRT1O95170 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDRT1O95170 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 AC008406.3-201ENST00000620001 1374 ntBASIC17.8■□□□□ 0.44
CDRT1O95170 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDRT1O95170 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDRT1O95170 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.8■□□□□ 0.44
CDRT1O95170 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.8■□□□□ 0.44
CDRT1O95170 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
CDRT1O95170 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.8■□□□□ 0.44
CDRT1O95170 AC027682.1-201ENST00000562846 899 ntBASIC17.8■□□□□ 0.44
CDRT1O95170 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 AC005082.1-201ENST00000413042 2259 ntBASIC17.8■□□□□ 0.44
CDRT1O95170 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDRT1O95170 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms