Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.34■□□□□ 0.37
HMX3A6NHT5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HMX3A6NHT5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.34■□□□□ 0.37
HMX3A6NHT5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
HMX3A6NHT5 AC092720.2-201ENST00000602388 1665 ntBASIC17.34■□□□□ 0.37
HMX3A6NHT5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.34■□□□□ 0.37
HMX3A6NHT5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.34■□□□□ 0.37
HMX3A6NHT5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMX3A6NHT5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMX3A6NHT5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
HMX3A6NHT5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.33■□□□□ 0.37
HMX3A6NHT5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HMX3A6NHT5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMX3A6NHT5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HMX3A6NHT5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMX3A6NHT5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMX3A6NHT5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
HMX3A6NHT5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.33■□□□□ 0.36
HMX3A6NHT5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMX3A6NHT5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.33■□□□□ 0.36
HMX3A6NHT5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMX3A6NHT5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
HMX3A6NHT5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.33■□□□□ 0.36
HMX3A6NHT5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMX3A6NHT5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMX3A6NHT5 AC135050.7-201ENST00000624508 2218 ntBASIC17.33■□□□□ 0.36
HMX3A6NHT5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMX3A6NHT5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMX3A6NHT5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMX3A6NHT5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMX3A6NHT5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HMX3A6NHT5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMX3A6NHT5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.32■□□□□ 0.36
HMX3A6NHT5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.32■□□□□ 0.36
HMX3A6NHT5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.32■□□□□ 0.36
HMX3A6NHT5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HMX3A6NHT5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.32■□□□□ 0.36
HMX3A6NHT5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.32■□□□□ 0.36
HMX3A6NHT5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.32■□□□□ 0.36
HMX3A6NHT5 MIR3181-201ENST00000578512 73 ntBASIC17.32■□□□□ 0.36
HMX3A6NHT5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.32■□□□□ 0.36
HMX3A6NHT5 MIR4466-201ENST00000606121 54 ntBASIC17.32■□□□□ 0.36
HMX3A6NHT5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.32■□□□□ 0.36
HMX3A6NHT5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HMX3A6NHT5 HCG11-201ENST00000411553 5696 ntBASIC17.32■□□□□ 0.36
HMX3A6NHT5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HMX3A6NHT5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 TMEM179-206ENST00000616017 1645 ntBASIC17.32■□□□□ 0.36
HMX3A6NHT5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.32■□□□□ 0.36
HMX3A6NHT5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMX3A6NHT5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HMX3A6NHT5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
HMX3A6NHT5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 TREX1-205ENST00000625293 1783 ntBASIC17.31■□□□□ 0.36
HMX3A6NHT5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.31■□□□□ 0.36
HMX3A6NHT5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.31■□□□□ 0.36
HMX3A6NHT5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.31■□□□□ 0.36
HMX3A6NHT5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.31■□□□□ 0.36
HMX3A6NHT5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HMX3A6NHT5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMX3A6NHT5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.3■□□□□ 0.36
HMX3A6NHT5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMX3A6NHT5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HMX3A6NHT5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMX3A6NHT5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms