Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 AC011551.1-201ENST00000614101 683 ntBASIC16.33■□□□□ 0.2
LINC00862A6NCI5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00862A6NCI5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 AC004448.1-201ENST00000458332 883 ntBASIC16.32■□□□□ 0.2
LINC00862A6NCI5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00862A6NCI5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LINC00862A6NCI5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00862A6NCI5 MST1L-201ENST00000442552 2185 ntBASIC16.3■□□□□ 0.2
LINC00862A6NCI5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms