Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 KRT17P3-201ENST00000420566 1262 ntBASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 AP005212.1-201ENST00000581547 1997 ntBASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB11Q9Y5F2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.64■□□□□ 0.74
PCDHB11Q9Y5F2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB11Q9Y5F2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB11Q9Y5F2 AC092667.1-201ENST00000434301 2586 ntBASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 AL359736.2-201ENST00000621992 437 ntBASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB11Q9Y5F2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 AC073314.1-201ENST00000568729 2216 ntBASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 AL121603.2-201ENST00000557373 2117 ntBASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB11Q9Y5F2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms