Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 pRNA.6-201ENST00000610482 90 ntBASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 pRNA.5-201ENST00000612139 90 ntBASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 pRNA.11-201ENST00000618423 90 ntBASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 pRNA.13-201ENST00000619112 90 ntBASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RAB3IPQ96QF0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3IPQ96QF0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 AL691432.2-201ENST00000607222 2038 ntBASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IPQ96QF0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
RAB3IPQ96QF0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IPQ96QF0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IPQ96QF0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IPQ96QF0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IPQ96QF0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IPQ96QF0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IPQ96QF0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IPQ96QF0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RAB3IPQ96QF0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IPQ96QF0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RAB3IPQ96QF0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms