Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 pRNA.6-201ENST00000610482 90 ntBASIC16.66■□□□□ 0.26
ZNF546Q86UE3 pRNA.5-201ENST00000612139 90 ntBASIC16.66■□□□□ 0.26
ZNF546Q86UE3 pRNA.11-201ENST00000618423 90 ntBASIC16.66■□□□□ 0.26
ZNF546Q86UE3 pRNA.13-201ENST00000619112 90 ntBASIC16.66■□□□□ 0.26
ZNF546Q86UE3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 AC079598.2-202ENST00000546624 1451 ntBASIC16.66■□□□□ 0.26
ZNF546Q86UE3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF546Q86UE3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 TREX1-205ENST00000625293 1783 ntBASIC16.65■□□□□ 0.26
ZNF546Q86UE3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 MIR6724-1-201ENST00000616420 92 ntBASIC16.65■□□□□ 0.26
ZNF546Q86UE3 MIR6724-2-201ENST00000616483 92 ntBASIC16.65■□□□□ 0.26
ZNF546Q86UE3 MIR6724-4-201ENST00000617390 92 ntBASIC16.65■□□□□ 0.26
ZNF546Q86UE3 MIR6724-3-201ENST00000622482 92 ntBASIC16.65■□□□□ 0.26
ZNF546Q86UE3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.65■□□□□ 0.26
ZNF546Q86UE3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.65■□□□□ 0.26
ZNF546Q86UE3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF546Q86UE3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF546Q86UE3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms