Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.15■□□□□ 0.02
MRPL54Q6P161 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
MRPL54Q6P161 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.15■□□□□ 0.02
MRPL54Q6P161 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MRPL54Q6P161 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL54Q6P161 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL54Q6P161 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL54Q6P161 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.15■□□□□ 0.02
MRPL54Q6P161 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MRPL54Q6P161 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
MRPL54Q6P161 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL54Q6P161 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL54Q6P161 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL54Q6P161 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.15■□□□□ 0.02
MRPL54Q6P161 RARRES2P2-201ENST00000394842 485 ntBASIC15.15■□□□□ 0.02
MRPL54Q6P161 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
MRPL54Q6P161 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.15■□□□□ 0.02
MRPL54Q6P161 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL54Q6P161 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL54Q6P161 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
MRPL54Q6P161 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL54Q6P161 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL54Q6P161 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL54Q6P161 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
MRPL54Q6P161 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.02
MRPL54Q6P161 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
MRPL54Q6P161 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
MRPL54Q6P161 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MRPL54Q6P161 AL049812.1-201ENST00000432563 2267 ntBASIC15.14■□□□□ 0.01
MRPL54Q6P161 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.14■□□□□ 0.01
MRPL54Q6P161 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
MRPL54Q6P161 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.14■□□□□ 0.01
MRPL54Q6P161 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.14■□□□□ 0.01
MRPL54Q6P161 AC241377.3-202ENST00000626088 1088 ntBASIC15.14■□□□□ 0.01
MRPL54Q6P161 AC241585.3-202ENST00000628937 1088 ntBASIC15.14■□□□□ 0.01
MRPL54Q6P161 AC245100.8-202ENST00000629247 1058 ntBASIC15.14■□□□□ 0.01
MRPL54Q6P161 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
MRPL54Q6P161 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.14■□□□□ 0.01
MRPL54Q6P161 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
MRPL54Q6P161 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.14■□□□□ 0.01
MRPL54Q6P161 Z82202.1-201ENST00000623446 1880 ntBASIC15.14■□□□□ 0.01
MRPL54Q6P161 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL54Q6P161 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL54Q6P161 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL54Q6P161 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 AC021242.3-201ENST00000607598 1377 ntBASIC15.13■□□□□ 0.01
MRPL54Q6P161 BX005040.4-201ENST00000637145 1518 ntBASIC15.13■□□□□ 0.01
MRPL54Q6P161 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL54Q6P161 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL54Q6P161 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL54Q6P161 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL54Q6P161 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL54Q6P161 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL54Q6P161 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL54Q6P161 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL54Q6P161 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL54Q6P161 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL54Q6P161 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MRPL54Q6P161 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL54Q6P161 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.12■□□□□ 0.01
MRPL54Q6P161 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.12■□□□□ 0.01
MRPL54Q6P161 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
MRPL54Q6P161 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
MRPL54Q6P161 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.12■□□□□ 0.01
MRPL54Q6P161 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL54Q6P161 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms