Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 CHD2-228ENST00000637613 986 ntTSL 54.3□□□□□ -1.725e-9■□□□□ 8.2
XRCC6P12956 MAN2A2-213ENST00000559374 851 ntTSL 518.58■□□□□ 0.563e-16■□□□□ 8.2
XRCC6P12956 GOLGA4-204ENST00000429018 2036 ntTSL 1 (best)18.53■□□□□ 0.564e-14■□□□□ 8.2
XRCC6P12956 SCAF8-204ENST00000461219 677 ntTSL 522.82■■□□□ 1.246e-8■□□□□ 8.2
XRCC6P12956 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.596e-8■□□□□ 8.2
XRCC6P12956 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC15.1■□□□□ 0.016e-8■□□□□ 8.2
XRCC6P12956 SCAF8-205ENST00000464628 468 ntTSL 512.3□□□□□ -0.446e-8■□□□□ 8.2
XRCC6P12956 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC12.09□□□□□ -0.476e-8■□□□□ 8.2
XRCC6P12956 EEF1B2-207ENST00000445505 515 ntTSL 520.25■□□□□ 0.839e-11■□□□□ 8.2
XRCC6P12956 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.449e-11■□□□□ 8.2
XRCC6P12956 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.369e-11■□□□□ 8.2
XRCC6P12956 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.049e-11■□□□□ 8.2
XRCC6P12956 EEF1B2-205ENST00000429769 912 ntTSL 512.15□□□□□ -0.469e-11■□□□□ 8.2
XRCC6P12956 EEF1B2-208ENST00000455150 670 ntTSL 56.6□□□□□ -1.359e-11■□□□□ 8.2
XRCC6P12956 SNORD51-201ENST00000384320 80 ntBASIC4.28□□□□□ -1.729e-11■□□□□ 8.2
XRCC6P12956 snoZ196.1-201ENST00000625269 89 ntBASIC2.5□□□□□ -2.019e-11■□□□□ 8.2
XRCC6P12956 PRSS21-205ENST00000571141 484 ntTSL 220.53■□□□□ 0.886e-16■□□□□ 8.2
XRCC6P12956 HBG1-202ENST00000632727 369 ntTSL 3 BASIC8.31□□□□□ -1.082e-75■□□□□ 8.2
XRCC6P12956 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.372e-75■□□□□ 8.2
XRCC6P12956 SNORD111-201ENST00000408139 94 ntBASIC1.22□□□□□ -2.216e-16■□□□□ 8.2
XRCC6P12956 DDX39B-206ENST00000419338 928 ntTSL 515.51■□□□□ 0.071e-69■□□□□ 8.2
XRCC6P12956 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.011e-69■□□□□ 8.2
XRCC6P12956 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.091e-69■□□□□ 8.2
XRCC6P12956 DDX39B-219ENST00000481456 5158 ntTSL 214.06□□□□□ -0.161e-69■□□□□ 8.2
XRCC6P12956 DDX39B-210ENST00000431908 914 ntTSL 513.17□□□□□ -0.31e-69■□□□□ 8.2
XRCC6P12956 DDX39B-204ENST00000418897 583 ntTSL 312.98□□□□□ -0.331e-69■□□□□ 8.2
XRCC6P12956 DDX39B-208ENST00000428098 817 ntTSL 312.98□□□□□ -0.331e-69■□□□□ 8.2
XRCC6P12956 DDX39B-212ENST00000456662 932 ntTSL 512.98□□□□□ -0.331e-69■□□□□ 8.2
XRCC6P12956 DDX39B-213ENST00000456976 720 ntTSL 512.91□□□□□ -0.341e-69■□□□□ 8.2
XRCC6P12956 DDX39B-209ENST00000428450 633 ntTSL 412.59□□□□□ -0.391e-69■□□□□ 8.2
XRCC6P12956 DDX39B-205ENST00000419020 583 ntTSL 312.56□□□□□ -0.41e-69■□□□□ 8.2
XRCC6P12956 ATP6V1G2-DDX39B-203ENST00000480131 552 ntAPPRIS P1 TSL 412.54□□□□□ -0.41e-69■□□□□ 8.2
XRCC6P12956 DDX39B-211ENST00000449757 591 ntTSL 311.33□□□□□ -0.61e-69■□□□□ 8.2
XRCC6P12956 DDX39B-220ENST00000482195 1232 ntTSL 211.33□□□□□ -0.61e-69■□□□□ 8.2
XRCC6P12956 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.621e-69■□□□□ 8.2
XRCC6P12956 DDX39B-215ENST00000462256 4027 ntTSL 210.51□□□□□ -0.731e-69■□□□□ 8.2
XRCC6P12956 DDX39B-207ENST00000427214 1005 ntTSL 57.4□□□□□ -1.221e-69■□□□□ 8.2
XRCC6P12956 SNORD84-203ENST00000584275 78 ntBASIC3.95□□□□□ -1.781e-69■□□□□ 8.2
XRCC6P12956 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.39■□□□□ 0.695e-8■□□□□ 8.1
XRCC6P12956 DUS1L-203ENST00000538833 1250 ntTSL 1 (best)19.59■□□□□ 0.733e-9■□□□□ 8.1
XRCC6P12956 DUS1L-213ENST00000580731 725 ntTSL 518.54■□□□□ 0.563e-9■□□□□ 8.1
XRCC6P12956 DUS1L-210ENST00000578846 4456 ntTSL 216.67■□□□□ 0.263e-9■□□□□ 8.1
XRCC6P12956 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.554e-17■□□□□ 8.1
XRCC6P12956 NOP56-220ENST00000616692 2662 ntTSL 1 (best)19.46■□□□□ 0.714e-17■□□□□ 8.1
XRCC6P12956 NOP56-219ENST00000612233 2980 nt16.62■□□□□ 0.254e-17■□□□□ 8.1
XRCC6P12956 NOP56-216ENST00000492135 1143 ntTSL 1 (best)15.93■□□□□ 0.144e-17■□□□□ 8.1
XRCC6P12956 NOP56-206ENST00000466447 1094 ntTSL 213.19□□□□□ -0.34e-17■□□□□ 8.1
XRCC6P12956 NOP56-202ENST00000415272 1628 ntTSL 511.96□□□□□ -0.54e-17■□□□□ 8.1
XRCC6P12956 NOP56-215ENST00000490753 640 ntTSL 210.63□□□□□ -0.714e-17■□□□□ 8.1
XRCC6P12956 NOP56-207ENST00000467196 1320 ntTSL 59.5□□□□□ -0.894e-17■□□□□ 8.1
XRCC6P12956 NOP56-211ENST00000471023 592 ntTSL 28.3□□□□□ -1.084e-17■□□□□ 8.1
XRCC6P12956 NOP56-212ENST00000480447 651 ntTSL 26.97□□□□□ -1.294e-17■□□□□ 8.1
XRCC6P12956 SNORD56-201ENST00000413522 71 ntBASIC3.38□□□□□ -1.874e-17■□□□□ 8.1
XRCC6P12956 EIF4A2-215ENST00000467585 570 ntTSL 214.37□□□□□ -0.113e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-208ENST00000445596 600 ntTSL 213.95□□□□□ -0.183e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.543e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-227ENST00000498746 579 ntTSL 211.51□□□□□ -0.573e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-203ENST00000426808 1751 ntTSL 1 (best)9.03□□□□□ -0.963e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-207ENST00000443963 1729 ntTSL 1 (best)8.22□□□□□ -1.093e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.183e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-202ENST00000425053 1977 ntTSL 57.66□□□□□ -1.183e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-211ENST00000465222 676 ntTSL 27.19□□□□□ -1.263e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-212ENST00000465267 1054 ntTSL 27.04□□□□□ -1.283e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-221ENST00000491473 579 ntTSL 27.04□□□□□ -1.283e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-218ENST00000475653 909 ntTSL 26.66□□□□□ -1.343e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-204ENST00000429589 1005 ntTSL 56.65□□□□□ -1.343e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-210ENST00000465032 578 ntTSL 26.65□□□□□ -1.343e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-224ENST00000495049 576 ntTSL 26.65□□□□□ -1.343e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-219ENST00000485101 5327 ntTSL 55.4□□□□□ -1.553e-29■□□□□ 8.1
XRCC6P12956 EIF4A2-220ENST00000486805 590 ntTSL 23.47□□□□□ -1.853e-29■□□□□ 8.1
XRCC6P12956 SNORD2-201ENST00000459163 69 ntBASIC0.05□□□□□ -2.43e-29■□□□□ 8.1
XRCC6P12956 RPL13A-206ENST00000476268 1623 ntTSL 320.74■□□□□ 0.911e-29■□□□□ 8.1
XRCC6P12956 RPL13A-208ENST00000477613 796 ntTSL 519.54■□□□□ 0.721e-29■□□□□ 8.1
XRCC6P12956 RPL13A-209ENST00000479992 850 ntTSL 317.81■□□□□ 0.441e-29■□□□□ 8.1
XRCC6P12956 RPL13A-211ENST00000486930 652 ntTSL 317.34■□□□□ 0.371e-29■□□□□ 8.1
XRCC6P12956 RPL13A-204ENST00000472481 728 ntTSL 216.99■□□□□ 0.311e-29■□□□□ 8.1
XRCC6P12956 RPL13A-202ENST00000467825 660 ntTSL 516.78■□□□□ 0.281e-29■□□□□ 8.1
XRCC6P12956 RPL13A-210ENST00000484279 794 ntTSL 515.38■□□□□ 0.051e-29■□□□□ 8.1
XRCC6P12956 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.28■■□□□ 1.165e-10■□□□□ 8.1
XRCC6P12956 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.265e-10■□□□□ 8.1
XRCC6P12956 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.285e-10■□□□□ 8.1
XRCC6P12956 GOLGA4-207ENST00000437131 6947 ntTSL 1 (best)2.78□□□□□ -1.965e-10■□□□□ 8.1
XRCC6P12956 SLC22A23-211ENST00000496753 561 ntTSL 413.03□□□□□ -0.324e-7■□□□□ 8.1
XRCC6P12956 PSMD2-208ENST00000459910 676 ntTSL 525.08■■□□□ 1.619e-8■□□□□ 8.1
XRCC6P12956 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.03■■□□□ 1.61e-14■□□□□ 8.1
XRCC6P12956 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.581e-14■□□□□ 8.1
XRCC6P12956 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.489e-8■□□□□ 8.1
XRCC6P12956 PSMD2-204ENST00000433010 942 ntTSL 323.34■■□□□ 1.339e-8■□□□□ 8.1
XRCC6P12956 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.329e-8■□□□□ 8.1
XRCC6P12956 GART-208ENST00000430874 1036 ntTSL 523.19■■□□□ 1.39e-8■□□□□ 8.1
XRCC6P12956 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.241e-14■□□□□ 8.1
XRCC6P12956 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.179e-8■□□□□ 8.1
XRCC6P12956 TRMT2A-211ENST00000468917 957 ntTSL 221.95■■□□□ 1.11e-14■□□□□ 8.1
XRCC6P12956 EEF1A1-205ENST00000455918 701 ntTSL 221.87■■□□□ 1.099e-8■□□□□ 8.1
XRCC6P12956 PSMD2-202ENST00000417952 721 ntTSL 320.99■□□□□ 0.959e-8■□□□□ 8.1
XRCC6P12956 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.869e-8■□□□□ 8.1
XRCC6P12956 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.851e-14■□□□□ 8.1
XRCC6P12956 MRFAP1-204ENST00000512914 1982 nt20.31■□□□□ 0.849e-8■□□□□ 8.1
XRCC6P12956 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.65■□□□□ 0.749e-8■□□□□ 8.1
XRCC6P12956 PSMD2-215ENST00000487475 910 ntTSL 219.25■□□□□ 0.679e-8■□□□□ 8.1
Retrieved 100 of 6,788 protein–RNA pairs in 26.2 ms