Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSDP07339 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSDP07339 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSDP07339 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSDP07339 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CTSDP07339 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CTSDP07339 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CTSDP07339 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.64■□□□□ 0.25
CTSDP07339 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSDP07339 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CTSDP07339 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.64■□□□□ 0.25
CTSDP07339 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSDP07339 AC012414.1-201ENST00000556676 535 ntBASIC16.64■□□□□ 0.25
CTSDP07339 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSDP07339 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
CTSDP07339 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSDP07339 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSDP07339 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTSDP07339 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CTSDP07339 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSDP07339 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSDP07339 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSDP07339 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.63■□□□□ 0.25
CTSDP07339 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSDP07339 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSDP07339 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSDP07339 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTSDP07339 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSDP07339 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTSDP07339 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CTSDP07339 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSDP07339 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.63■□□□□ 0.25
CTSDP07339 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTSDP07339 TPRG1LP1-201ENST00000598702 760 ntBASIC16.63■□□□□ 0.25
CTSDP07339 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CTSDP07339 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.63■□□□□ 0.25
CTSDP07339 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSDP07339 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.63■□□□□ 0.25
CTSDP07339 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSDP07339 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSDP07339 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTSDP07339 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CTSDP07339 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.62■□□□□ 0.25
CTSDP07339 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSDP07339 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSDP07339 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CTSDP07339 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSDP07339 PBX2P1-201ENST00000493219 1291 ntBASIC16.62■□□□□ 0.25
CTSDP07339 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.62■□□□□ 0.25
CTSDP07339 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.62■□□□□ 0.25
CTSDP07339 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.62■□□□□ 0.25
CTSDP07339 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CTSDP07339 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CTSDP07339 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.62■□□□□ 0.25
CTSDP07339 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CTSDP07339 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSDP07339 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.62■□□□□ 0.25
CTSDP07339 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSDP07339 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSDP07339 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CTSDP07339 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CTSDP07339 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSDP07339 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CTSDP07339 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSDP07339 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.61■□□□□ 0.25
CTSDP07339 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSDP07339 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CTSDP07339 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.61■□□□□ 0.25
CTSDP07339 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSDP07339 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTSDP07339 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.61■□□□□ 0.25
CTSDP07339 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.61■□□□□ 0.25
CTSDP07339 AC079140.4-201ENST00000507448 529 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms