Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC8.36□□□□□ -1.07
UBE4BO95155 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.36□□□□□ -1.07
UBE4BO95155 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
UBE4BO95155 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC8.36□□□□□ -1.07
UBE4BO95155 AL353622.1-201ENST00000604716 1945 ntBASIC8.36□□□□□ -1.07
UBE4BO95155 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
UBE4BO95155 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.36□□□□□ -1.07
UBE4BO95155 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 AC018992.1-201ENST00000523778 2149 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
UBE4BO95155 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC8.35□□□□□ -1.07
UBE4BO95155 LST1-211ENST00000376110 433 ntTSL 3 BASIC8.35□□□□□ -1.07
UBE4BO95155 MSRB1P1-201ENST00000396851 354 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 AC092952.1-201ENST00000397646 1209 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 NUS1P4-201ENST00000401550 585 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 KRT18P52-201ENST00000404956 846 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC8.35□□□□□ -1.07
UBE4BO95155 RPL34P19-201ENST00000415903 342 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC8.35□□□□□ -1.07
UBE4BO95155 RNF11P2-201ENST00000427702 440 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.35□□□□□ -1.07
UBE4BO95155 SALL1P1-201ENST00000438101 3837 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 CHIAP1-201ENST00000456220 995 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 RN7SL414P-201ENST00000469545 294 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 RN7SL153P-201ENST00000486501 292 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 RPL37-205ENST00000509877 637 ntTSL 5 BASIC8.35□□□□□ -1.07
UBE4BO95155 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.35□□□□□ -1.07
UBE4BO95155 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.35□□□□□ -1.07
UBE4BO95155 AL355076.3-201ENST00000555838 587 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC8.35□□□□□ -1.07
UBE4BO95155 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC8.35□□□□□ -1.07
UBE4BO95155 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 AL137802.2-201ENST00000562878 1110 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC8.35□□□□□ -1.07
UBE4BO95155 AC004839.1-201ENST00000610269 501 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 MIAT_exon1.1-201ENST00000617016 135 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC8.35□□□□□ -1.07
UBE4BO95155 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.35□□□□□ -1.07
UBE4BO95155 EEF1A1P4-201ENST00000359165 1405 ntBASIC8.35□□□□□ -1.07
UBE4BO95155 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
UBE4BO95155 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
UBE4BO95155 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
UBE4BO95155 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
UBE4BO95155 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
UBE4BO95155 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
UBE4BO95155 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
UBE4BO95155 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
UBE4BO95155 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.34□□□□□ -1.07
UBE4BO95155 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
UBE4BO95155 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
UBE4BO95155 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
UBE4BO95155 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
UBE4BO95155 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC8.34□□□□□ -1.07
UBE4BO95155 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC8.34□□□□□ -1.07
UBE4BO95155 PPCS-204ENST00000372562 966 ntTSL 2 BASIC8.34□□□□□ -1.07
UBE4BO95155 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
UBE4BO95155 RN7SKP89-201ENST00000410774 242 ntBASIC8.34□□□□□ -1.07
UBE4BO95155 CRIP1P3-201ENST00000416794 220 ntBASIC8.34□□□□□ -1.07
UBE4BO95155 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC8.34□□□□□ -1.07
UBE4BO95155 AC002553.1-201ENST00000442828 802 ntBASIC8.34□□□□□ -1.07
UBE4BO95155 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC8.34□□□□□ -1.07
UBE4BO95155 RPS29P5-201ENST00000452777 171 ntBASIC8.34□□□□□ -1.07
UBE4BO95155 AC005550.2-201ENST00000476382 318 ntBASIC8.34□□□□□ -1.07
UBE4BO95155 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
UBE4BO95155 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC8.34□□□□□ -1.07
UBE4BO95155 AC022296.2-201ENST00000512424 202 ntBASIC8.34□□□□□ -1.07
UBE4BO95155 IGLV10-67-201ENST00000519446 325 ntBASIC8.34□□□□□ -1.07
UBE4BO95155 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC8.34□□□□□ -1.07
UBE4BO95155 OR7E87P-201ENST00000532397 929 ntBASIC8.34□□□□□ -1.07
UBE4BO95155 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC8.34□□□□□ -1.07
UBE4BO95155 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.34□□□□□ -1.07
UBE4BO95155 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC8.34□□□□□ -1.07
UBE4BO95155 AC103724.4-201ENST00000605981 292 ntBASIC8.34□□□□□ -1.07
UBE4BO95155 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
UBE4BO95155 AC104447.1-201ENST00000624214 2124 ntBASIC8.34□□□□□ -1.07
UBE4BO95155 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC8.34□□□□□ -1.07
UBE4BO95155 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
UBE4BO95155 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms