RNA–Protein interactions for RNA: ENST00000629295.1

LINC00506-203, long intergenic non-protein coding RNA 506, humanhuman

TSL 1 (best) BASIC

Gene LINC00506, Length 4,300 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00506-203ENST00000629295 NISCHQ9Y2I1 1504 aa14.75□□□□□ -0.05
LINC00506-203ENST00000629295 DCAF8L2P0C7V8 631 aa13.62□□□□□ -0.23
LINC00506-203ENST00000629295 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
LINC00506-203ENST00000629295 SUPT5HO00267 1087 aaKnown RBP13.4□□□□□ -0.26
LINC00506-203ENST00000629295 PCGF6Q9BYE7 350 aa13□□□□□ -0.33
LINC00506-203ENST00000629295 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.33
LINC00506-203ENST00000629295 HRCP23327 699 aa12.94□□□□□ -0.34
LINC00506-203ENST00000629295 CHIC1Q5VXU3 224 aa12.81□□□□□ -0.36
LINC00506-203ENST00000629295 MYT1Q01538 1121 aa12.78□□□□□ -0.36
LINC00506-203ENST00000629295 PPARGC1BQ86YN6 1023 aaKnown RBP12.76□□□□□ -0.37
LINC00506-203ENST00000629295 LOC105371045A0A1W2PR82 267 aa12.62□□□□□ -0.39
LINC00506-203ENST00000629295 MYO15BQ96JP2 1530 aa12.58□□□□□ -0.4
LINC00506-203ENST00000629295 EHMT2Q96KQ7 1210 aa12.54□□□□□ -0.4
LINC00506-203ENST00000629295 TRIM26Q12899 539 aaPredicted RBP12.51□□□□□ -0.41
LINC00506-203ENST00000629295 FAM9AQ8IZU1 332 aaPredicted RBP12.47□□□□□ -0.41
LINC00506-203ENST00000629295 ZCCHC6Q5VYS8 1495 aaKnown RBP12.45□□□□□ -0.42
LINC00506-203ENST00000629295 ZEB1P37275 1124 aaPredicted RBP12.42□□□□□ -0.42
LINC00506-203ENST00000629295 TRIM41Q8WV44 630 aa12.37□□□□□ -0.43
LINC00506-203ENST00000629295 DCAF1Q9Y4B6 1507 aa12.33□□□□□ -0.44
LINC00506-203ENST00000629295 CCER1Q8TC90 406 aaPredicted RBP12.2□□□□□ -0.46
LINC00506-203ENST00000629295 TTBK1Q5TCY1 1321 aaPredicted RBP12.18□□□□□ -0.46
LINC00506-203ENST00000629295 CCDC180Q9P1Z9 1646 aa12.15□□□□□ -0.46
LINC00506-203ENST00000629295 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
LINC00506-203ENST00000629295 CENPBP07199 599 aaPredicted RBP12.1□□□□□ -0.47
LINC00506-203ENST00000629295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.1□□□□□ -0.47
LINC00506-203ENST00000629295 ABCC9O60706 1549 aa12.05□□□□□ -0.48
LINC00506-203ENST00000629295 DIEXFQ68CQ4 756 aaKnown RBP11.98□□□□□ -0.49
LINC00506-203ENST00000629295 ACIN1Q9UKV3 1341 aaKnown RBP11.97□□□□□ -0.49
LINC00506-203ENST00000629295 YTHDC1Q96MU7 727 aaKnown RBP11.97□□□□□ -0.49
LINC00506-203ENST00000629295 GTF3C3Q9Y5Q9 886 aa11.95□□□□□ -0.5
LINC00506-203ENST00000629295 NEUROD1Q13562 356 aa11.92□□□□□ -0.5
LINC00506-203ENST00000629295 RSF1Q96T23 1441 aaPredicted RBP11.88□□□□□ -0.51
LINC00506-203ENST00000629295 UBTFP17480 764 aaKnown RBP11.88□□□□□ -0.51
LINC00506-203ENST00000629295 SCRIBQ14160 1630 aa11.84□□□□□ -0.51
LINC00506-203ENST00000629295 PABPN1Q86U42 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC00506-203ENST00000629295 APLP2Q06481 763 aa11.79□□□□□ -0.52
LINC00506-203ENST00000629295 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.53
LINC00506-203ENST00000629295 RANGAP1P46060 587 aaPredicted RBP11.77□□□□□ -0.53
LINC00506-203ENST00000629295 ZNF316A6NFI3 1004 aaPredicted RBP11.74□□□□□ -0.53
LINC00506-203ENST00000629295 RB1CC1Q8TDY2 1594 aa11.74□□□□□ -0.53
LINC00506-203ENST00000629295 ERICH6Q7L0X2 663 aa11.69□□□□□ -0.54
LINC00506-203ENST00000629295 CECR2Q9BXF3 1484 aa11.62□□□□□ -0.55
LINC00506-203ENST00000629295 CSRNP3Q8WYN3 585 aa11.61□□□□□ -0.55
LINC00506-203ENST00000629295 MIER1Q8N108 512 aa11.6□□□□□ -0.55
LINC00506-203ENST00000629295 CEP162Q5TB80 1403 aa11.57□□□□□ -0.56
LINC00506-203ENST00000629295 MROH2BQ7Z745 1585 aa11.54□□□□□ -0.56
LINC00506-203ENST00000629295 BCL11AQ9H165 835 aa11.5□□□□□ -0.57
LINC00506-203ENST00000629295 ITGAEP38570 1179 aa11.47□□□□□ -0.57
LINC00506-203ENST00000629295 TNIKQ9UKE5 1360 aa11.47□□□□□ -0.57
LINC00506-203ENST00000629295 SOGA1O94964 1423 aa11.46□□□□□ -0.58
LINC00506-203ENST00000629295 WIZO95785 1651 aa11.45□□□□□ -0.58
LINC00506-203ENST00000629295 ATP1B4Q9UN42 357 aaPredicted RBP11.45□□□□□ -0.58
LINC00506-203ENST00000629295 CCDC88BA6NC98 1476 aa11.44□□□□□ -0.58
LINC00506-203ENST00000629295 ABCC8Q09428 1581 aa11.43□□□□□ -0.58
LINC00506-203ENST00000629295 WRNQ14191 1432 aaPredicted RBP eCLIP11.4□□□□□ -0.58
LINC00506-203ENST00000629295 BCANQ96GW7 911 aa11.39□□□□□ -0.59
LINC00506-203ENST00000629295 NEFLP07196 543 aa11.38□□□□□ -0.59
LINC00506-203ENST00000629295 NACADO15069 1562 aa11.38□□□□□ -0.59
LINC00506-203ENST00000629295 GOLGA3Q08378 1498 aa11.38□□□□□ -0.59
LINC00506-203ENST00000629295 EEA1Q15075 1411 aa11.37□□□□□ -0.59
LINC00506-203ENST00000629295 CLIP1P30622 1438 aa11.37□□□□□ -0.59
LINC00506-203ENST00000629295 BAZ1AQ9NRL2 1556 aaPredicted RBP11.35□□□□□ -0.59
LINC00506-203ENST00000629295 CLSPNQ9HAW4 1339 aa11.32□□□□□ -0.6
LINC00506-203ENST00000629295 RUSC2Q8N2Y8 1516 aa11.32□□□□□ -0.6
LINC00506-203ENST00000629295 SUPT16HQ9Y5B9 1047 aaKnown RBP11.31□□□□□ -0.6
LINC00506-203ENST00000629295 CEP164Q9UPV0 1460 aa11.27□□□□□ -0.61
LINC00506-203ENST00000629295 PRKCSHP14314 528 aaPredicted RBP11.26□□□□□ -0.61
LINC00506-203ENST00000629295 FKBP8Q14318 412 aa11.25□□□□□ -0.61
LINC00506-203ENST00000629295 FBLN2P98095 1184 aa11.24□□□□□ -0.61
LINC00506-203ENST00000629295 TOP2AP11388 1531 aaKnown RBP11.24□□□□□ -0.61
LINC00506-203ENST00000629295 VPS8Q8N3P4 1428 aa11.23□□□□□ -0.61
LINC00506-203ENST00000629295 DDX10Q13206 875 aaKnown RBP11.22□□□□□ -0.61
LINC00506-203ENST00000629295 FAM50AQ14320 339 aaKnown RBP11.21□□□□□ -0.61
LINC00506-203ENST00000629295 MYT1LQ9UL68 1186 aa11.2□□□□□ -0.62
LINC00506-203ENST00000629295 ANP32EQ9BTT0 268 aa11.19□□□□□ -0.62
LINC00506-203ENST00000629295 TSHZ2Q9NRE2 1034 aa11.18□□□□□ -0.62
LINC00506-203ENST00000629295 SMARCA2P51531 1590 aa11.16□□□□□ -0.62
LINC00506-203ENST00000629295 ANP32CO43423 234 aa11.16□□□□□ -0.62
LINC00506-203ENST00000629295 TRIM52Q96A61 297 aa11.16□□□□□ -0.62
LINC00506-203ENST00000629295 KANK4Q5T7N3 995 aaPredicted RBP11.16□□□□□ -0.62
LINC00506-203ENST00000629295 HIRIP3Q9BW71 556 aaPredicted RBP11.15□□□□□ -0.63
LINC00506-203ENST00000629295 DHX57Q6P158 1386 aaKnown RBP11.14□□□□□ -0.63
LINC00506-203ENST00000629295 EIF5BO60841 1220 aaKnown RBP11.14□□□□□ -0.63
LINC00506-203ENST00000629295 KCNH8Q96L42 1107 aa11.13□□□□□ -0.63
LINC00506-203ENST00000629295 SMARCA4P51532 1647 aa11.13□□□□□ -0.63
LINC00506-203ENST00000629295 RAPGEF2Q9Y4G8 1499 aa11.13□□□□□ -0.63
LINC00506-203ENST00000629295 P3H3Q8IVL6 736 aa11.09□□□□□ -0.63
LINC00506-203ENST00000629295 SIN3AQ96ST3 1273 aa11.08□□□□□ -0.64
LINC00506-203ENST00000629295 EIF4G1Q04637 1599 aaKnown RBP11.07□□□□□ -0.64
LINC00506-203ENST00000629295 CCNB3Q8WWL7 1395 aa11.07□□□□□ -0.64
LINC00506-203ENST00000629295 CDK11AQ9UQ88 783 aaPredicted RBP11.05□□□□□ -0.64
LINC00506-203ENST00000629295 RTL5Q5HYW3 569 aaPredicted RBP11.05□□□□□ -0.64
LINC00506-203ENST00000629295 BAZ1BQ9UIG0 1483 aaKnown RBP11.03□□□□□ -0.64
LINC00506-203ENST00000629295 IRX6P78412 446 aaPredicted RBP11.03□□□□□ -0.64
LINC00506-203ENST00000629295 HNRNPUQ00839 825 aaKnown RBP eCLIP11.02□□□□□ -0.64
LINC00506-203ENST00000629295 RBM19Q9Y4C8 960 aaKnown RBP11.02□□□□□ -0.65
LINC00506-203ENST00000629295 KIF21BO75037 1637 aa11.02□□□□□ -0.65
LINC00506-203ENST00000629295 CNGB1Q14028 1251 aaPredicted RBP11.01□□□□□ -0.65
LINC00506-203ENST00000629295 RAB3GAP2Q9H2M9 1393 aa11□□□□□ -0.65
LINC00506-203ENST00000629295 SYNJ1O43426 1573 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms