RNA–Protein interactions for RNA: ENST00000401550.2

NUS1P4-201, Transcript of NUS1 pseudogene 4, humanhuman

BASIC

Gene NUS1P4, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUS1P4-201ENST00000401550 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
NUS1P4-201ENST00000401550 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
NUS1P4-201ENST00000401550 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
NUS1P4-201ENST00000401550 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
NUS1P4-201ENST00000401550 FOXD1Q16676 465 aa20.15■□□□□ 0.82
NUS1P4-201ENST00000401550 PLPPR3Q6T4P5 718 aa19.01■□□□□ 0.63
NUS1P4-201ENST00000401550 MSH5O43196 834 aa18.95■□□□□ 0.62
NUS1P4-201ENST00000401550 PIAS4Q8N2W9 510 aaPredicted RBP18.78■□□□□ 0.6
NUS1P4-201ENST00000401550 POTEDQ86YR6 584 aa18.74■□□□□ 0.59
NUS1P4-201ENST00000401550 PPP6R1Q9UPN7 881 aa18.72■□□□□ 0.59
NUS1P4-201ENST00000401550 ADRA2BP18089 450 aa18.64■□□□□ 0.57
NUS1P4-201ENST00000401550 NISCHQ9Y2I1 1504 aa17.96■□□□□ 0.47
NUS1P4-201ENST00000401550 MAPK8IP2Q13387 824 aaPredicted RBP17.17■□□□□ 0.34
NUS1P4-201ENST00000401550 DMRT2Q9Y5R5 561 aa17.11■□□□□ 0.33
NUS1P4-201ENST00000401550 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
NUS1P4-201ENST00000401550 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
NUS1P4-201ENST00000401550 HOXD11P31277 338 aaPredicted RBP16.44■□□□□ 0.22
NUS1P4-201ENST00000401550 DCAF8L1A6NGE4 600 aa16.39■□□□□ 0.21
NUS1P4-201ENST00000401550 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
NUS1P4-201ENST00000401550 CACNB1Q02641 598 aaPredicted RBP16.34■□□□□ 0.21
NUS1P4-201ENST00000401550 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
NUS1P4-201ENST00000401550 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
NUS1P4-201ENST00000401550 NCBP3Q53F19 620 aaKnown RBP15.97■□□□□ 0.15
NUS1P4-201ENST00000401550 DNAJC5BQ9UF47 199 aa15.94■□□□□ 0.14
NUS1P4-201ENST00000401550 C1QBPQ07021 282 aaKnown RBP15.92■□□□□ 0.14
NUS1P4-201ENST00000401550 CCDC180Q9P1Z9 1646 aa15.81■□□□□ 0.12
NUS1P4-201ENST00000401550 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
NUS1P4-201ENST00000401550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.64■□□□□ 0.09
NUS1P4-201ENST00000401550 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
NUS1P4-201ENST00000401550 KCNA4P22459 653 aa15.25■□□□□ 0.03
NUS1P4-201ENST00000401550 SPINK5Q9NQ38 1064 aaPredicted RBP15.1■□□□□ 0.01
NUS1P4-201ENST00000401550 ABCC9O60706 1549 aa15.09■□□□□ 0.01
NUS1P4-201ENST00000401550 CAPN15O75808 1086 aa15.09■□□□□ 0.01
NUS1P4-201ENST00000401550 DSG3P32926 999 aa15.06■□□□□ 0
NUS1P4-201ENST00000401550 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
NUS1P4-201ENST00000401550 SLC4A2P04920 1241 aa15.05■□□□□ -0
NUS1P4-201ENST00000401550 DCAF1Q9Y4B6 1507 aa14.91□□□□□ -0.02
NUS1P4-201ENST00000401550 APLP2Q06481 763 aa14.88□□□□□ -0.03
NUS1P4-201ENST00000401550 MYO15BQ96JP2 1530 aa14.86□□□□□ -0.03
NUS1P4-201ENST00000401550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
NUS1P4-201ENST00000401550 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
NUS1P4-201ENST00000401550 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
NUS1P4-201ENST00000401550 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
NUS1P4-201ENST00000401550 NACADO15069 1562 aa14.77□□□□□ -0.04
NUS1P4-201ENST00000401550 SAMD1Q6SPF0 538 aaPredicted RBP14.73□□□□□ -0.05
NUS1P4-201ENST00000401550 ABCB7O75027 752 aa14.71□□□□□ -0.05
NUS1P4-201ENST00000401550 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
NUS1P4-201ENST00000401550 RB1CC1Q8TDY2 1594 aa14.68□□□□□ -0.06
NUS1P4-201ENST00000401550 POTEHQ6S545 545 aa14.66□□□□□ -0.06
NUS1P4-201ENST00000401550 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
NUS1P4-201ENST00000401550 SCRIBQ14160 1630 aa14.41□□□□□ -0.1
NUS1P4-201ENST00000401550 POLA2Q14181 598 aa14.39□□□□□ -0.11
NUS1P4-201ENST00000401550 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
NUS1P4-201ENST00000401550 SLC4A1APQ9BWU0 796 aaKnown RBP14.38□□□□□ -0.11
NUS1P4-201ENST00000401550 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
NUS1P4-201ENST00000401550 BICRAQ9NZM4 1560 aa14.3□□□□□ -0.12
NUS1P4-201ENST00000401550 FOXD4L1Q9NU39 408 aa14.29□□□□□ -0.12
NUS1P4-201ENST00000401550 SHROOM4Q9ULL8 1493 aa14.29□□□□□ -0.12
NUS1P4-201ENST00000401550 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
NUS1P4-201ENST00000401550 CHRDL2Q6WN34 429 aa14.13□□□□□ -0.15
NUS1P4-201ENST00000401550 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
NUS1P4-201ENST00000401550 ZBTB12Q9Y330 459 aaPredicted RBP14.11□□□□□ -0.15
NUS1P4-201ENST00000401550 AKT1S1Q96B36 256 aa14.02□□□□□ -0.17
NUS1P4-201ENST00000401550 ZBTB22O15209 634 aa14.01□□□□□ -0.17
NUS1P4-201ENST00000401550 CECR2Q9BXF3 1484 aa13.94□□□□□ -0.18
NUS1P4-201ENST00000401550 ATXN8OSP0DMR3 200 aa13.91□□□□□ -0.18
NUS1P4-201ENST00000401550 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
NUS1P4-201ENST00000401550 REM2Q8IYK8 340 aaPredicted RBP13.88□□□□□ -0.19
NUS1P4-201ENST00000401550 BAZ1AQ9NRL2 1556 aaPredicted RBP13.88□□□□□ -0.19
NUS1P4-201ENST00000401550 EIF4G1Q04637 1599 aaKnown RBP13.85□□□□□ -0.19
NUS1P4-201ENST00000401550 SMARCA4P51532 1647 aa13.85□□□□□ -0.19
NUS1P4-201ENST00000401550 MROH2BQ7Z745 1585 aa13.84□□□□□ -0.19
NUS1P4-201ENST00000401550 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
NUS1P4-201ENST00000401550 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
NUS1P4-201ENST00000401550 PIP4P2Q8N4L2 257 aa13.75□□□□□ -0.21
NUS1P4-201ENST00000401550 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
NUS1P4-201ENST00000401550 ATAD2BQ9ULI0 1458 aa13.7□□□□□ -0.22
NUS1P4-201ENST00000401550 CC2D2AQ9P2K1 1620 aa13.69□□□□□ -0.22
NUS1P4-201ENST00000401550 FBLN2P98095 1184 aa13.68□□□□□ -0.22
NUS1P4-201ENST00000401550 WIZO95785 1651 aa13.68□□□□□ -0.22
NUS1P4-201ENST00000401550 SMARCA2P51531 1590 aa13.67□□□□□ -0.22
NUS1P4-201ENST00000401550 SP7Q8TDD2 431 aaPredicted RBP13.67□□□□□ -0.22
NUS1P4-201ENST00000401550 SPDYE2BA6NHP3 402 aa13.66□□□□□ -0.22
NUS1P4-201ENST00000401550 SPDYE6P0CI01 402 aa13.66□□□□□ -0.22
NUS1P4-201ENST00000401550 SPDYE2Q495Y8 402 aa13.66□□□□□ -0.22
NUS1P4-201ENST00000401550 FXR2P51116 673 aaKnown RBP eCLIP13.65□□□□□ -0.22
NUS1P4-201ENST00000401550 NCAPD3P42695 1498 aa13.65□□□□□ -0.22
NUS1P4-201ENST00000401550 HMGXB3Q12766 1538 aa13.61□□□□□ -0.23
NUS1P4-201ENST00000401550 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
NUS1P4-201ENST00000401550 TOP2AP11388 1531 aaKnown RBP13.58□□□□□ -0.24
NUS1P4-201ENST00000401550 BAZ1BQ9UIG0 1483 aaKnown RBP13.56□□□□□ -0.24
NUS1P4-201ENST00000401550 HAX1O00165 279 aa13.55□□□□□ -0.24
NUS1P4-201ENST00000401550 MKRN4PQ13434 485 aaPredicted RBP13.54□□□□□ -0.24
NUS1P4-201ENST00000401550 SPDYE1Q8NFV5 336 aaPredicted RBP13.46□□□□□ -0.25
NUS1P4-201ENST00000401550 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
NUS1P4-201ENST00000401550 SSUH2Q9Y2M2 353 aa13.44□□□□□ -0.26
NUS1P4-201ENST00000401550 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
NUS1P4-201ENST00000401550 CCDC88BA6NC98 1476 aa13.41□□□□□ -0.26
NUS1P4-201ENST00000401550 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
NUS1P4-201ENST00000401550 EVX2Q03828 476 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms