RNA–Protein interactions for RNA: ENST00000425388.1

LINC00501-201, long intergenic non-protein coding RNA 501, humanhuman

TSL 2 BASIC

Gene LINC00501, Length 2,046 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00501-201ENST00000425388 SLC24A1O60721 1099 aa15.29■□□□□ 0.04
LINC00501-201ENST00000425388 NISCHQ9Y2I1 1504 aa15.18■□□□□ 0.02
LINC00501-201ENST00000425388 CHIC1Q5VXU3 224 aa14.76□□□□□ -0.05
LINC00501-201ENST00000425388 PELP1Q8IZL8 1130 aaKnown RBP14.39□□□□□ -0.11
LINC00501-201ENST00000425388 AEBP2Q6ZN18 517 aaPredicted RBP14.2□□□□□ -0.14
LINC00501-201ENST00000425388 EHMT2Q96KQ7 1210 aa14.17□□□□□ -0.14
LINC00501-201ENST00000425388 MYT1Q01538 1121 aa14.12□□□□□ -0.15
LINC00501-201ENST00000425388 DAXXQ9UER7 740 aaPredicted RBP13.87□□□□□ -0.19
LINC00501-201ENST00000425388 HRCP23327 699 aa13.82□□□□□ -0.2
LINC00501-201ENST00000425388 PLPPR3Q6T4P5 718 aa13.73□□□□□ -0.21
LINC00501-201ENST00000425388 RTN4Q9NQC3 1192 aaKnown RBP13.72□□□□□ -0.21
LINC00501-201ENST00000425388 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
LINC00501-201ENST00000425388 AMER1Q5JTC6 1135 aaPredicted RBP13.59□□□□□ -0.23
LINC00501-201ENST00000425388 TTBK1Q5TCY1 1321 aaPredicted RBP13.47□□□□□ -0.25
LINC00501-201ENST00000425388 KCNA4P22459 653 aa13.27□□□□□ -0.28
LINC00501-201ENST00000425388 CCDC180Q9P1Z9 1646 aa13.27□□□□□ -0.29
LINC00501-201ENST00000425388 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
LINC00501-201ENST00000425388 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
LINC00501-201ENST00000425388 PHF23Q9BUL5 403 aaPredicted RBP13.22□□□□□ -0.29
LINC00501-201ENST00000425388 PPARGC1BQ86YN6 1023 aaKnown RBP13.2□□□□□ -0.3
LINC00501-201ENST00000425388 ARXQ96QS3 562 aa13.17□□□□□ -0.3
LINC00501-201ENST00000425388 PCGF6Q9BYE7 350 aa13.1□□□□□ -0.31
LINC00501-201ENST00000425388 APLP2Q06481 763 aa13.09□□□□□ -0.31
LINC00501-201ENST00000425388 PRKCSHP14314 528 aaPredicted RBP13.06□□□□□ -0.32
LINC00501-201ENST00000425388 ZEB1P37275 1124 aaPredicted RBP13□□□□□ -0.33
LINC00501-201ENST00000425388 ERICH6Q7L0X2 663 aa12.96□□□□□ -0.33
LINC00501-201ENST00000425388 DCAF1Q9Y4B6 1507 aa12.94□□□□□ -0.34
LINC00501-201ENST00000425388 MYO15BQ96JP2 1530 aa12.9□□□□□ -0.34
LINC00501-201ENST00000425388 ACIN1Q9UKV3 1341 aaKnown RBP12.87□□□□□ -0.35
LINC00501-201ENST00000425388 TIMELESSQ9UNS1 1208 aa12.87□□□□□ -0.35
LINC00501-201ENST00000425388 CENPBP07199 599 aaPredicted RBP12.79□□□□□ -0.36
LINC00501-201ENST00000425388 TAOK2Q9UL54 1235 aa12.79□□□□□ -0.36
LINC00501-201ENST00000425388 ZCCHC6Q5VYS8 1495 aaKnown RBP12.77□□□□□ -0.36
LINC00501-201ENST00000425388 RANGAP1P46060 587 aaPredicted RBP12.77□□□□□ -0.37
LINC00501-201ENST00000425388 TRIM26Q12899 539 aaPredicted RBP12.76□□□□□ -0.37
LINC00501-201ENST00000425388 HOMEZQ8IX15 550 aa12.72□□□□□ -0.37
LINC00501-201ENST00000425388 BCL11AQ9H165 835 aa12.72□□□□□ -0.37
LINC00501-201ENST00000425388 BCANQ96GW7 911 aa12.71□□□□□ -0.38
LINC00501-201ENST00000425388 GTF3C3Q9Y5Q9 886 aa12.69□□□□□ -0.38
LINC00501-201ENST00000425388 TULP1O00294 542 aaPredicted RBP12.69□□□□□ -0.38
LINC00501-201ENST00000425388 NEUROD1Q13562 356 aa12.68□□□□□ -0.38
LINC00501-201ENST00000425388 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
LINC00501-201ENST00000425388 TPRNQ4KMQ1 711 aa12.53□□□□□ -0.4
LINC00501-201ENST00000425388 FAM9AQ8IZU1 332 aaPredicted RBP12.52□□□□□ -0.4
LINC00501-201ENST00000425388 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
LINC00501-201ENST00000425388 ANP32EQ9BTT0 268 aa12.47□□□□□ -0.41
LINC00501-201ENST00000425388 PLCB2Q00722 1185 aa12.45□□□□□ -0.42
LINC00501-201ENST00000425388 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
LINC00501-201ENST00000425388 CLSPNQ9HAW4 1339 aa12.35□□□□□ -0.43
LINC00501-201ENST00000425388 NACADO15069 1562 aa12.34□□□□□ -0.43
LINC00501-201ENST00000425388 DIEXFQ68CQ4 756 aaKnown RBP12.34□□□□□ -0.43
LINC00501-201ENST00000425388 DCAF8L2P0C7V8 631 aa12.33□□□□□ -0.43
LINC00501-201ENST00000425388 KLHL34Q8N239 644 aa12.33□□□□□ -0.44
LINC00501-201ENST00000425388 ABCC9O60706 1549 aa12.32□□□□□ -0.44
LINC00501-201ENST00000425388 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.44
LINC00501-201ENST00000425388 HAP1P54257 671 aaPredicted RBP12.27□□□□□ -0.44
LINC00501-201ENST00000425388 EIF5BO60841 1220 aaKnown RBP12.23□□□□□ -0.45
LINC00501-201ENST00000425388 RB1CC1Q8TDY2 1594 aa12.19□□□□□ -0.46
LINC00501-201ENST00000425388 LOC105371045A0A1W2PR82 267 aa12.19□□□□□ -0.46
LINC00501-201ENST00000425388 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
LINC00501-201ENST00000425388 NPM2Q86SE8 214 aaKnown RBP12.11□□□□□ -0.47
LINC00501-201ENST00000425388 VSIG10Q8N0Z9 540 aa12.11□□□□□ -0.47
LINC00501-201ENST00000425388 TMEM132AQ24JP5 1023 aa12.1□□□□□ -0.47
LINC00501-201ENST00000425388 TSHZ2Q9NRE2 1034 aa12.09□□□□□ -0.47
LINC00501-201ENST00000425388 SCRIBQ14160 1630 aa12.05□□□□□ -0.48
LINC00501-201ENST00000425388 FBXO3Q9UK99 471 aa12.05□□□□□ -0.48
LINC00501-201ENST00000425388 ZBTB22O15209 634 aa12.04□□□□□ -0.48
LINC00501-201ENST00000425388 CCER1Q8TC90 406 aaPredicted RBP12.04□□□□□ -0.48
LINC00501-201ENST00000425388 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
LINC00501-201ENST00000425388 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
LINC00501-201ENST00000425388 SUPT16HQ9Y5B9 1047 aaKnown RBP12.01□□□□□ -0.49
LINC00501-201ENST00000425388 C14orf37Q86TY3 774 aa12.01□□□□□ -0.49
LINC00501-201ENST00000425388 YTHDC1Q96MU7 727 aaKnown RBP11.99□□□□□ -0.49
LINC00501-201ENST00000425388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.93□□□□□ -0.5
LINC00501-201ENST00000425388 SENP3Q9H4L4 574 aaPredicted RBP11.92□□□□□ -0.5
LINC00501-201ENST00000425388 ADRA2BP18089 450 aa11.9□□□□□ -0.5
LINC00501-201ENST00000425388 MIER1Q8N108 512 aa11.88□□□□□ -0.51
LINC00501-201ENST00000425388 ERICH6BQ5W0A0 696 aa11.87□□□□□ -0.51
LINC00501-201ENST00000425388 FKBP8Q14318 412 aa11.86□□□□□ -0.51
LINC00501-201ENST00000425388 UNC13AQ9UPW8 1703 aa11.85□□□□□ -0.51
LINC00501-201ENST00000425388 UBE2Q2Q8WVN8 375 aa11.84□□□□□ -0.51
LINC00501-201ENST00000425388 KDM2AQ9Y2K7 1162 aa11.82□□□□□ -0.52
LINC00501-201ENST00000425388 RSF1Q96T23 1441 aaPredicted RBP11.77□□□□□ -0.52
LINC00501-201ENST00000425388 BICRAQ9NZM4 1560 aa11.77□□□□□ -0.52
LINC00501-201ENST00000425388 RBM19Q9Y4C8 960 aaKnown RBP11.77□□□□□ -0.53
LINC00501-201ENST00000425388 ANO8Q9HCE9 1232 aaPredicted RBP11.76□□□□□ -0.53
LINC00501-201ENST00000425388 BAZ1AQ9NRL2 1556 aaPredicted RBP11.74□□□□□ -0.53
LINC00501-201ENST00000425388 FANCIQ9NVI1 1328 aa11.73□□□□□ -0.53
LINC00501-201ENST00000425388 CECR2Q9BXF3 1484 aa11.7□□□□□ -0.54
LINC00501-201ENST00000425388 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
LINC00501-201ENST00000425388 DEKP35659 375 aaKnown RBP11.67□□□□□ -0.54
LINC00501-201ENST00000425388 FBLN2P98095 1184 aa11.67□□□□□ -0.54
LINC00501-201ENST00000425388 MSH5O43196 834 aa11.64□□□□□ -0.55
LINC00501-201ENST00000425388 NPM3O75607 178 aaKnown RBP11.64□□□□□ -0.55
LINC00501-201ENST00000425388 PLEKHG5O94827 1062 aa11.64□□□□□ -0.55
LINC00501-201ENST00000425388 SMARCA4P51532 1647 aa11.64□□□□□ -0.55
LINC00501-201ENST00000425388 UBTFP17480 764 aaKnown RBP11.62□□□□□ -0.55
LINC00501-201ENST00000425388 WRNQ14191 1432 aaPredicted RBP eCLIP11.62□□□□□ -0.55
LINC00501-201ENST00000425388 PABPN1Q86U42 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
LINC00501-201ENST00000425388 SALL2Q9Y467 1007 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms