Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 LCN12-206ENST00000471615 489 ntTSL 518.44■□□□□ 0.544e-8■■■■□ 23.3
XRN2Q9H0D6 LCN12-207ENST00000476751 536 ntTSL 218.44■□□□□ 0.544e-8■■■■□ 23.3
XRN2Q9H0D6 LCN12-204ENST00000466277 781 ntTSL 217.38■□□□□ 0.374e-8■■■■□ 23.3
XRN2Q9H0D6 LCN12-201ENST00000371632 403 ntTSL 215.22■□□□□ 0.034e-8■■■■□ 23.3
XRN2Q9H0D6 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.14e-8■■■■□ 23.3
XRN2Q9H0D6 IGF1R-210ENST00000559925 2280 ntTSL 1 (best)14.67□□□□□ -0.067e-7■■■■□ 23.3
XRN2Q9H0D6 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.747e-7■■■■□ 23.3
XRN2Q9H0D6 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.167e-7■■■■□ 23.3
XRN2Q9H0D6 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)9.6□□□□□ -0.874e-7■■■■□ 23.3
XRN2Q9H0D6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.88■□□□□ 0.134e-7■■■■□ 23.3
XRN2Q9H0D6 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.38e-8■■■■□ 23.3
XRN2Q9H0D6 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.31□□□□□ -0.125e-9■■■■□ 23.3
XRN2Q9H0D6 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.525e-9■■■■□ 23.3
XRN2Q9H0D6 KDM5B-210ENST00000602511 542 ntTSL 59□□□□□ -0.975e-9■■■■□ 23.3
XRN2Q9H0D6 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC9.25□□□□□ -0.932e-6■■■■□ 23.2
XRN2Q9H0D6 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.952e-6■■■■□ 23.2
XRN2Q9H0D6 PELI1-204ENST00000494203 602 ntTSL 429.24■■■□□ 2.275e-8■■■■□ 23.2
XRN2Q9H0D6 PELI1-202ENST00000466177 698 ntTSL 525.37■■□□□ 1.655e-8■■■■□ 23.2
XRN2Q9H0D6 PELI1-203ENST00000468869 553 ntTSL 423.01■■□□□ 1.275e-8■■■■□ 23.2
XRN2Q9H0D6 PELI1-201ENST00000358912 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.665e-8■■■■□ 23.2
XRN2Q9H0D6 GNB1-204ENST00000439272 602 ntTSL 511.05□□□□□ -0.647e-7■■■■□ 23.2
XRN2Q9H0D6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.461e-6■■■■□ 23.2
XRN2Q9H0D6 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.281e-6■■■■□ 23.2
XRN2Q9H0D6 NRF1-207ENST00000477428 513 ntTSL 317.85■□□□□ 0.452e-6■■■■□ 23.1
XRN2Q9H0D6 NRF1-206ENST00000454688 814 ntTSL 517.29■□□□□ 0.362e-6■■■■□ 23.1
XRN2Q9H0D6 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.372e-6■■■■□ 23.1
XRN2Q9H0D6 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.36□□□□□ -0.432e-6■■■■□ 23.1
XRN2Q9H0D6 NRF1-205ENST00000393232 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.592e-6■■■■□ 23.1
XRN2Q9H0D6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.161e-6■■■■□ 23.1
XRN2Q9H0D6 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.01□□□□□ -0.171e-6■■■■□ 23.1
XRN2Q9H0D6 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.99□□□□□ -0.171e-6■■■■□ 23.1
XRN2Q9H0D6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.66■■□□□ 1.064e-6■■■■□ 23.1
XRN2Q9H0D6 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC13.17□□□□□ -0.33e-6■■■■□ 23.1
XRN2Q9H0D6 LENG8-AS1-203ENST00000448978 464 ntTSL 512.99□□□□□ -0.334e-6■■■■□ 23.1
XRN2Q9H0D6 LENG8-AS1-202ENST00000429922 871 ntTSL 4 BASIC10.45□□□□□ -0.744e-6■■■■□ 23.1
XRN2Q9H0D6 SETD5-202ENST00000399686 3362 ntTSL 57.08□□□□□ -1.284e-7■■■■□ 23.1
XRN2Q9H0D6 SETD5-206ENST00000413704 3428 ntTSL 26.83□□□□□ -1.324e-7■■■■□ 23.1
XRN2Q9H0D6 SETD5-217ENST00000466242 4038 ntTSL 26.34□□□□□ -1.44e-7■■■■□ 23.1
XRN2Q9H0D6 OGT-204ENST00000455587 632 ntTSL 311.12□□□□□ -0.634e-30■■■■□ 23.1
XRN2Q9H0D6 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.264e-30■■■■□ 23.1
XRN2Q9H0D6 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.444e-30■■■■□ 23.1
XRN2Q9H0D6 OGT-210ENST00000488174 7243 ntTSL 55.87□□□□□ -1.474e-30■■■■□ 23.1
XRN2Q9H0D6 NAPB-206ENST00000487502 699 ntTSL 227.7■■■□□ 2.022e-7■■■■□ 23.1
XRN2Q9H0D6 NAPB-204ENST00000468128 782 ntTSL 526.12■■□□□ 1.772e-7■■■■□ 23.1
XRN2Q9H0D6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.391e-7■■■■□ 23.1
XRN2Q9H0D6 P4HB-207ENST00000472244 858 ntTSL 522.63■■□□□ 1.214e-6■■■■□ 23.1
XRN2Q9H0D6 P4HB-211ENST00000477607 1110 ntTSL 1 (best)19.16■□□□□ 0.664e-6■■■■□ 23.1
XRN2Q9H0D6 TAL1-206ENST00000481091 504 ntTSL 318.82■□□□□ 0.63e-7■■■■□ 23.1
XRN2Q9H0D6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.493e-7■■■■□ 23.1
XRN2Q9H0D6 P4HB-218ENST00000574007 1053 ntTSL 216.64■□□□□ 0.254e-6■■■■□ 23.1
XRN2Q9H0D6 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.32e-7■■■■□ 23.1
XRN2Q9H0D6 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.12□□□□□ -0.312e-7■■■■□ 23.1
XRN2Q9H0D6 NAPB-203ENST00000432543 3754 ntTSL 2 BASIC12.79□□□□□ -0.362e-7■■■■□ 23.1
XRN2Q9H0D6 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.372e-7■■■■□ 23.1
XRN2Q9H0D6 TAL1-204ENST00000464796 237 ntTSL 1 (best)10.66□□□□□ -0.73e-7■■■■□ 23.1
XRN2Q9H0D6 NAPB-205ENST00000472855 1651 ntTSL 28.12□□□□□ -1.112e-7■■■■□ 23.1
XRN2Q9H0D6 P4HB-214ENST00000570907 353 ntTSL 36.3□□□□□ -1.44e-6■■■■□ 23.1
XRN2Q9H0D6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.87■□□□□ 0.294e-10■■■■□ 23.1
XRN2Q9H0D6 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC13.5□□□□□ -0.254e-10■■■■□ 23.1
XRN2Q9H0D6 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC12.92□□□□□ -0.344e-10■■■■□ 23.1
XRN2Q9H0D6 WDR6-207ENST00000448293 3377 ntTSL 2 BASIC12.16□□□□□ -0.464e-10■■■■□ 23.1
XRN2Q9H0D6 WDR6-211ENST00000471162 3565 ntTSL 1 (best)11.74□□□□□ -0.534e-10■■■■□ 23.1
XRN2Q9H0D6 WDR6-204ENST00000420783 3656 ntTSL 1 (best)11.33□□□□□ -0.594e-10■■■■□ 23.1
XRN2Q9H0D6 WDR6-208ENST00000452875 3916 ntTSL 1 (best)11.12□□□□□ -0.634e-10■■■■□ 23.1
XRN2Q9H0D6 WDR6-220ENST00000608424 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.724e-10■■■■□ 23.1
XRN2Q9H0D6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.91■■■□□ 2.388e-21■■■■□ 23.1
XRN2Q9H0D6 TPT1-205ENST00000442760 902 ntTSL 224.51■■□□□ 1.518e-21■■■■□ 23.1
XRN2Q9H0D6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.82■■□□□ 1.242e-6■■■■□ 23.1
XRN2Q9H0D6 EIPR1-204ENST00000435721 672 ntTSL 322.33■■□□□ 1.172e-6■■■■□ 23.1
XRN2Q9H0D6 EIPR1-203ENST00000406835 738 ntTSL 522.33■■□□□ 1.172e-6■■■■□ 23.1
XRN2Q9H0D6 EIPR1-207ENST00000444776 594 ntTSL 421.43■■□□□ 1.022e-6■■■■□ 23.1
XRN2Q9H0D6 EIPR1-205ENST00000441271 647 ntTSL 520.19■□□□□ 0.822e-6■■■■□ 23.1
XRN2Q9H0D6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.642e-6■■■■□ 23.1
XRN2Q9H0D6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.94■□□□□ 0.462e-6■■■■□ 23.1
XRN2Q9H0D6 EIPR1-212ENST00000478754 2932 ntTSL 516.3■□□□□ 0.22e-6■■■■□ 23.1
XRN2Q9H0D6 TPT1-208ENST00000527226 613 ntTSL 216.04■□□□□ 0.168e-21■■■■□ 23.1
XRN2Q9H0D6 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC14.91□□□□□ -0.028e-21■■■■□ 23.1
XRN2Q9H0D6 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC14.71□□□□□ -0.058e-21■■■■□ 23.1
XRN2Q9H0D6 TPT1-212ENST00000530705 4735 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.398e-21■■■■□ 23.1
XRN2Q9H0D6 EIPR1-208ENST00000455162 847 ntTSL 511.66□□□□□ -0.542e-6■■■■□ 23.1
XRN2Q9H0D6 TPT1-207ENST00000490277 1851 ntTSL 210.66□□□□□ -0.78e-21■■■■□ 23.1
XRN2Q9H0D6 TPT1-214ENST00000616577 4814 ntTSL 3 BASIC10.41□□□□□ -0.748e-21■■■■□ 23.1
XRN2Q9H0D6 EIPR1-210ENST00000463662 757 ntTSL 310.19□□□□□ -0.782e-6■■■■□ 23.1
XRN2Q9H0D6 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.65□□□□□ -1.348e-21■■■■□ 23.1
XRN2Q9H0D6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.028e-8■■■■□ 23
XRN2Q9H0D6 AGAP3-214ENST00000476375 1019 ntTSL 514.84□□□□□ -0.036e-6■■■■□ 23
XRN2Q9H0D6 EIF4A2-206ENST00000441007 480 ntTSL 316.65■□□□□ 0.262e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-208ENST00000445596 600 ntTSL 216■□□□□ 0.152e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.722e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-218ENST00000475653 909 ntTSL 28.02□□□□□ -1.132e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-207ENST00000443963 1729 ntTSL 1 (best)7.8□□□□□ -1.162e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-203ENST00000426808 1751 ntTSL 1 (best)7.79□□□□□ -1.162e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-212ENST00000465267 1054 ntTSL 27.78□□□□□ -1.162e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-224ENST00000495049 576 ntTSL 27.78□□□□□ -1.162e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-204ENST00000429589 1005 ntTSL 57.78□□□□□ -1.162e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-210ENST00000465032 578 ntTSL 27.78□□□□□ -1.162e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-211ENST00000465222 676 ntTSL 27.51□□□□□ -1.212e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-221ENST00000491473 579 ntTSL 26.89□□□□□ -1.312e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.342e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-202ENST00000425053 1977 ntTSL 55.76□□□□□ -1.492e-9■■■■□ 23
Retrieved 100 of 21,068 protein–RNA pairs in 117 ms