RNA–Protein interactions for RNA: ENST00000602511.1

KDM5B-210, Transcript of lysine demethylase 5B, humanhuman

TSL 5

Gene KDM5B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-210ENST00000602511 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
KDM5B-210ENST00000602511 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
KDM5B-210ENST00000602511 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
KDM5B-210ENST00000602511 CCDC180Q9P1Z9 1646 aa17.03■□□□□ 0.32
KDM5B-210ENST00000602511 ABCC9O60706 1549 aa16.53■□□□□ 0.24
KDM5B-210ENST00000602511 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
KDM5B-210ENST00000602511 PHF23Q9BUL5 403 aaPredicted RBP16.15■□□□□ 0.18
KDM5B-210ENST00000602511 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
KDM5B-210ENST00000602511 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
KDM5B-210ENST00000602511 DCAF1Q9Y4B6 1507 aa16■□□□□ 0.15
KDM5B-210ENST00000602511 MYO15BQ96JP2 1530 aa15.93■□□□□ 0.14
KDM5B-210ENST00000602511 NACADO15069 1562 aa15.82■□□□□ 0.12
KDM5B-210ENST00000602511 RB1CC1Q8TDY2 1594 aa15.72■□□□□ 0.11
KDM5B-210ENST00000602511 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
KDM5B-210ENST00000602511 DCAF8L2P0C7V8 631 aa15.58■□□□□ 0.08
KDM5B-210ENST00000602511 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.07
KDM5B-210ENST00000602511 SCRIBQ14160 1630 aa15.39■□□□□ 0.05
KDM5B-210ENST00000602511 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
KDM5B-210ENST00000602511 SHROOM4Q9ULL8 1493 aa15.21■□□□□ 0.03
KDM5B-210ENST00000602511 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
KDM5B-210ENST00000602511 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
KDM5B-210ENST00000602511 PLPPR3Q6T4P5 718 aa14.9□□□□□ -0.02
KDM5B-210ENST00000602511 BAZ1AQ9NRL2 1556 aaPredicted RBP14.89□□□□□ -0.03
KDM5B-210ENST00000602511 FOXD1Q16676 465 aa14.87□□□□□ -0.03
KDM5B-210ENST00000602511 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
KDM5B-210ENST00000602511 CC2D2AQ9P2K1 1620 aa14.84□□□□□ -0.03
KDM5B-210ENST00000602511 EIF4G1Q04637 1599 aaKnown RBP14.75□□□□□ -0.05
KDM5B-210ENST00000602511 MROH2BQ7Z745 1585 aa14.75□□□□□ -0.05
KDM5B-210ENST00000602511 PEG3Q9GZU2 1588 aa14.75□□□□□ -0.05
KDM5B-210ENST00000602511 RSF1Q96T23 1441 aaPredicted RBP14.72□□□□□ -0.05
KDM5B-210ENST00000602511 TRIM41Q8WV44 630 aa14.69□□□□□ -0.06
KDM5B-210ENST00000602511 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
KDM5B-210ENST00000602511 WIZO95785 1651 aa14.65□□□□□ -0.06
KDM5B-210ENST00000602511 HMGXB3Q12766 1538 aa14.58□□□□□ -0.08
KDM5B-210ENST00000602511 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
KDM5B-210ENST00000602511 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
KDM5B-210ENST00000602511 CUX2O14529 1486 aa14.56□□□□□ -0.08
KDM5B-210ENST00000602511 NCAPD3P42695 1498 aa14.52□□□□□ -0.08
KDM5B-210ENST00000602511 SUPT5HO00267 1087 aaKnown RBP14.52□□□□□ -0.09
KDM5B-210ENST00000602511 BAZ1BQ9UIG0 1483 aaKnown RBP14.49□□□□□ -0.09
KDM5B-210ENST00000602511 ERCC6Q03468 1493 aa14.33□□□□□ -0.12
KDM5B-210ENST00000602511 PRDM2Q13029 1718 aa14.3□□□□□ -0.12
KDM5B-210ENST00000602511 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
KDM5B-210ENST00000602511 PPP6R1Q9UPN7 881 aa14.26□□□□□ -0.13
KDM5B-210ENST00000602511 ADRA2BP18089 450 aa14.24□□□□□ -0.13
KDM5B-210ENST00000602511 LAMC3Q9Y6N6 1575 aa14.14□□□□□ -0.15
KDM5B-210ENST00000602511 CFTRP13569 1480 aa14.13□□□□□ -0.15
KDM5B-210ENST00000602511 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
KDM5B-210ENST00000602511 PIAS4Q8N2W9 510 aaPredicted RBP14.02□□□□□ -0.17
KDM5B-210ENST00000602511 KIF21AQ7Z4S6 1674 aa13.96□□□□□ -0.17
KDM5B-210ENST00000602511 NESP48681 1621 aa13.94□□□□□ -0.18
KDM5B-210ENST00000602511 BIVM-ERCC5R4GMW8 1640 aa13.94□□□□□ -0.18
KDM5B-210ENST00000602511 PDS5BQ9NTI5 1447 aa13.94□□□□□ -0.18
KDM5B-210ENST00000602511 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
KDM5B-210ENST00000602511 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
KDM5B-210ENST00000602511 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
KDM5B-210ENST00000602511 TOP2BQ02880 1626 aa13.9□□□□□ -0.18
KDM5B-210ENST00000602511 CEP164Q9UPV0 1460 aa13.9□□□□□ -0.18
KDM5B-210ENST00000602511 WRNQ14191 1432 aaPredicted RBP eCLIP13.89□□□□□ -0.19
KDM5B-210ENST00000602511 SYNJ1O43426 1573 aa13.87□□□□□ -0.19
KDM5B-210ENST00000602511 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
KDM5B-210ENST00000602511 CUX1P39880 1505 aa13.83□□□□□ -0.2
KDM5B-210ENST00000602511 MRC2Q9UBG0 1479 aa13.79□□□□□ -0.2
KDM5B-210ENST00000602511 WDR62O43379 1518 aa13.78□□□□□ -0.2
KDM5B-210ENST00000602511 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
KDM5B-210ENST00000602511 URB2Q14146 1524 aaKnown RBP13.76□□□□□ -0.21
KDM5B-210ENST00000602511 MSH5O43196 834 aa13.76□□□□□ -0.21
KDM5B-210ENST00000602511 OSCARQ8IYS5 282 aa13.76□□□□□ -0.21
KDM5B-210ENST00000602511 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
KDM5B-210ENST00000602511 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
KDM5B-210ENST00000602511 FGD5Q6ZNL6 1462 aa13.7□□□□□ -0.22
KDM5B-210ENST00000602511 RIMBP3CA6NJZ7 1639 aa13.7□□□□□ -0.22
KDM5B-210ENST00000602511 RIMBP3BA6NNM3 1639 aa13.7□□□□□ -0.22
KDM5B-210ENST00000602511 RIMBP3Q9UFD9 1639 aa13.7□□□□□ -0.22
KDM5B-210ENST00000602511 POLA1P09884 1462 aaPredicted RBP13.67□□□□□ -0.22
KDM5B-210ENST00000602511 EEA1Q15075 1411 aa13.67□□□□□ -0.22
KDM5B-210ENST00000602511 TARBP1Q13395 1621 aaKnown RBP13.65□□□□□ -0.22
KDM5B-210ENST00000602511 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
KDM5B-210ENST00000602511 ILDR1Q86SU0 546 aaPredicted RBP13.62□□□□□ -0.23
KDM5B-210ENST00000602511 ABCA5Q8WWZ7 1642 aa13.6□□□□□ -0.23
KDM5B-210ENST00000602511 IFT140Q96RY7 1462 aa13.59□□□□□ -0.23
KDM5B-210ENST00000602511 SOGA1O94964 1423 aa13.58□□□□□ -0.24
KDM5B-210ENST00000602511 KIF27Q86VH2 1401 aa13.57□□□□□ -0.24
KDM5B-210ENST00000602511 ARHGEF11O15085 1522 aa13.56□□□□□ -0.24
KDM5B-210ENST00000602511 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
KDM5B-210ENST00000602511 CYB5RLQ6IPT4 315 aa13.55□□□□□ -0.24
KDM5B-210ENST00000602511 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
KDM5B-210ENST00000602511 KIF21BO75037 1637 aa13.53□□□□□ -0.24
KDM5B-210ENST00000602511 CUL7Q14999 1698 aa13.53□□□□□ -0.24
KDM5B-210ENST00000602511 ERICH3Q5RHP9 1530 aa13.52□□□□□ -0.25
KDM5B-210ENST00000602511 EIF4G3O43432 1585 aaKnown RBP13.5□□□□□ -0.25
KDM5B-210ENST00000602511 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
KDM5B-210ENST00000602511 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
KDM5B-210ENST00000602511 PRXQ9BXM0 1461 aa13.44□□□□□ -0.26
KDM5B-210ENST00000602511 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
KDM5B-210ENST00000602511 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
KDM5B-210ENST00000602511 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
KDM5B-210ENST00000602511 ZNF608Q9ULD9 1512 aaPredicted RBP13.41□□□□□ -0.26
KDM5B-210ENST00000602511 IGF1RP08069 1367 aa13.41□□□□□ -0.26
KDM5B-210ENST00000602511 GOLGA3Q08378 1498 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms