Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 AC006970.2-201ENST00000450065 779 ntBASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 SLC7A5P2-201ENST00000553010 536 ntBASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 LETM1P2-201ENST00000597330 2178 ntBASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBA1CQ9BQE3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBA1CQ9BQE3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 MIR663A-201ENST00000385250 93 ntBASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 HLA-L-209ENST00000420110 1011 ntBASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBA1CQ9BQE3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 AC004408.2-201ENST00000623613 2777 ntBASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 AC008175.2-201ENST00000612840 297 ntBASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 AC010536.3-201ENST00000620306 533 ntBASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 AC231657.2-201ENST00000624556 255 ntBASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TUBA1CQ9BQE3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 AC007322.1-201ENST00000426983 750 ntBASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms