Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXB1Q99853 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXB1Q99853 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXB1Q99853 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXB1Q99853 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
FOXB1Q99853 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXB1Q99853 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXB1Q99853 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXB1Q99853 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXB1Q99853 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.71■□□□□ 0.43
FOXB1Q99853 AC133041.1-202ENST00000642053 222 ntBASIC17.71■□□□□ 0.43
FOXB1Q99853 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXB1Q99853 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXB1Q99853 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXB1Q99853 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXB1Q99853 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXB1Q99853 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXB1Q99853 AL162377.1-201ENST00000618844 1793 ntBASIC17.71■□□□□ 0.43
FOXB1Q99853 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
FOXB1Q99853 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.71■□□□□ 0.42
FOXB1Q99853 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.71■□□□□ 0.42
FOXB1Q99853 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXB1Q99853 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
FOXB1Q99853 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 AC073210.2-201ENST00000430369 194 ntBASIC17.7■□□□□ 0.42
FOXB1Q99853 AC069152.1-201ENST00000438030 544 ntBASIC17.7■□□□□ 0.42
FOXB1Q99853 AC097658.1-201ENST00000475555 843 ntBASIC17.7■□□□□ 0.42
FOXB1Q99853 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXB1Q99853 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
FOXB1Q99853 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXB1Q99853 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
FOXB1Q99853 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXB1Q99853 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
FOXB1Q99853 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
FOXB1Q99853 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXB1Q99853 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FOXB1Q99853 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
FOXB1Q99853 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXB1Q99853 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXB1Q99853 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXB1Q99853 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXB1Q99853 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.69■□□□□ 0.42
FOXB1Q99853 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXB1Q99853 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FOXB1Q99853 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXB1Q99853 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.69■□□□□ 0.42
FOXB1Q99853 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
FOXB1Q99853 AC098934.4-201ENST00000564127 592 ntBASIC17.69■□□□□ 0.42
FOXB1Q99853 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXB1Q99853 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXB1Q99853 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
FOXB1Q99853 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXB1Q99853 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXB1Q99853 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXB1Q99853 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXB1Q99853 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXB1Q99853 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXB1Q99853 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXB1Q99853 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXB1Q99853 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXB1Q99853 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.68■□□□□ 0.42
FOXB1Q99853 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
FOXB1Q99853 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXB1Q99853 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
FOXB1Q99853 MYC-209ENST00000641252 345 ntBASIC17.68■□□□□ 0.42
FOXB1Q99853 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
FOXB1Q99853 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
FOXB1Q99853 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXB1Q99853 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXB1Q99853 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXB1Q99853 PTBP1P-201ENST00000554374 1601 ntBASIC17.68■□□□□ 0.42
FOXB1Q99853 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXB1Q99853 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
FOXB1Q99853 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXB1Q99853 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXB1Q99853 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FOXB1Q99853 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXB1Q99853 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXB1Q99853 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXB1Q99853 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.67■□□□□ 0.42
FOXB1Q99853 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXB1Q99853 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXB1Q99853 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
FOXB1Q99853 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXB1Q99853 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXB1Q99853 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXB1Q99853 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms