Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 KRT18P68-201ENST00000392293 1000 ntBASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 MKRN4P-201ENST00000444706 1521 ntBASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIMC1Q8NDZ2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 AL162377.1-201ENST00000618844 1793 ntBASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 AL121832.2-201ENST00000610979 668 ntBASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SIMC1Q8NDZ2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SIMC1Q8NDZ2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms