Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 VPS13D-201ENST00000011700 10969 ntTSL 1 (best)6.91□□□□□ -1.38e-7■■■■□ 21.9
MATR3P43243 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.468e-7■■■■□ 21.9
MATR3P43243 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.528e-7■■■■□ 21.9
MATR3P43243 FHIT-207ENST00000490952 1720 ntTSL 1 (best)10.2□□□□□ -0.782e-6■■■■□ 21.9
MATR3P43243 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC14.7□□□□□ -0.062e-7■■■■□ 21.9
MATR3P43243 ACACA-245ENST00000619546 5315 ntTSL 1 (best)10.58□□□□□ -0.722e-7■■■■□ 21.9
MATR3P43243 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.838e-9■■■■□ 21.9
MATR3P43243 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.22□□□□□ -1.092e-7■■■■□ 21.9
MATR3P43243 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.79□□□□□ -1.162e-7■■■■□ 21.9
MATR3P43243 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.242e-7■■■■□ 21.9
MATR3P43243 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.316e-7■■■■□ 21.9
MATR3P43243 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.41■□□□□ 0.386e-7■■■■□ 21.9
MATR3P43243 UBE2H-209ENST00000496698 561 ntTSL 46.67□□□□□ -1.346e-7■■■■□ 21.9
MATR3P43243 CCNY-206ENST00000470025 346 ntTSL 54.63□□□□□ -1.673e-7■■■■□ 21.9
MATR3P43243 PRKCZ-208ENST00000468310 690 ntTSL 523.54■■□□□ 1.363e-6■■■■□ 21.9
MATR3P43243 PRKCZ-216ENST00000479566 501 ntTSL 318.39■□□□□ 0.533e-6■■■■□ 21.9
MATR3P43243 PRKCZ-207ENST00000466651 425 ntTSL 512.89□□□□□ -0.353e-6■■■■□ 21.9
MATR3P43243 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.611e-6■■■■□ 21.9
MATR3P43243 RSRC1-212ENST00000482822 792 ntTSL 24.24□□□□□ -1.731e-6■■■■□ 21.9
MATR3P43243 MARK3-223ENST00000561071 746 ntTSL 37.62□□□□□ -1.196e-12■■■■□ 21.9
MATR3P43243 GPC3-203ENST00000406757 836 ntTSL 29.13□□□□□ -0.951e-6■■■■□ 21.9
MATR3P43243 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.125e-7■■■■□ 21.9
MATR3P43243 MARCH3-202ENST00000502289 764 ntTSL 421.38■■□□□ 1.016e-7■■■■□ 21.9
MATR3P43243 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.026e-7■■■■□ 21.9
MATR3P43243 TFPI-207ENST00000421427 804 ntTSL 310.76□□□□□ -0.698e-7■■■■□ 21.9
MATR3P43243 TFPI-206ENST00000420747 685 ntTSL 38.13□□□□□ -1.118e-7■■■■□ 21.9
MATR3P43243 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.4□□□□□ -1.388e-7■■■■□ 21.9
MATR3P43243 TFPI-209ENST00000437725 545 ntTSL 45.81□□□□□ -1.488e-7■■■■□ 21.9
MATR3P43243 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.6□□□□□ -1.678e-7■■■■□ 21.9
MATR3P43243 TFPI-210ENST00000453013 733 ntTSL 24.29□□□□□ -1.728e-7■■■■□ 21.9
MATR3P43243 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.778e-7■■■■□ 21.9
MATR3P43243 TFPI-205ENST00000417013 554 ntTSL 23.31□□□□□ -1.888e-7■■■■□ 21.9
MATR3P43243 MTA3-209ENST00000454356 1702 ntTSL 532.35■■■□□ 2.776e-6■■■■□ 21.9
MATR3P43243 LHFPL2-203ENST00000503686 577 ntTSL 430.32■■■□□ 2.446e-6■■■■□ 21.9
MATR3P43243 ARF1-209ENST00000478424 1059 ntTSL 227.25■■□□□ 1.956e-6■■■■□ 21.9
MATR3P43243 RRBP1-205ENST00000398782 1191 ntAPPRIS ALT2 TSL 226.6■■□□□ 1.856e-6■■■■□ 21.9
MATR3P43243 ARF1-208ENST00000478336 930 ntTSL 226.19■■□□□ 1.786e-6■■■■□ 21.9
MATR3P43243 SOX13-209ENST00000534185 723 ntTSL 525.69■■□□□ 1.76e-6■■■■□ 21.9
MATR3P43243 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.37■■□□□ 1.656e-6■■■■□ 21.9
MATR3P43243 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.68■■□□□ 1.546e-6■■■■□ 21.9
MATR3P43243 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.536e-6■■■■□ 21.9
MATR3P43243 AC026412.1-205ENST00000522848 1130 ntTSL 224.13■■□□□ 1.456e-6■■■■□ 21.9
MATR3P43243 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.436e-6■■■■□ 21.9
MATR3P43243 SOX13-208ENST00000530882 769 ntTSL 323.97■■□□□ 1.436e-6■■■■□ 21.9
MATR3P43243 KIAA0232-205ENST00000508423 700 ntTSL 223.61■■□□□ 1.378e-7■■■■□ 21.9
MATR3P43243 HOOK1-203ENST00000465876 2228 ntTSL 223.05■■□□□ 1.286e-6■■■■□ 21.9
MATR3P43243 ARF1-206ENST00000473949 578 ntTSL 522.69■■□□□ 1.226e-6■■■■□ 21.9
MATR3P43243 DCAF17-207ENST00000490217 708 ntTSL 322.62■■□□□ 1.216e-6■■■■□ 21.9
MATR3P43243 HOOK1-202ENST00000455990 519 ntTSL 422.61■■□□□ 1.216e-6■■■■□ 21.9
MATR3P43243 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.26e-6■■■■□ 21.9
MATR3P43243 ZZZ3-203ENST00000414381 561 ntTSL 422.54■■□□□ 1.26e-6■■■■□ 21.9
MATR3P43243 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.196e-6■■■■□ 21.9
MATR3P43243 HADHB-203ENST00000412805 574 ntTSL 421.96■■□□□ 1.112e-6■■■■□ 21.9
MATR3P43243 MPP5-207ENST00000557783 567 ntTSL 421.96■■□□□ 1.116e-6■■■■□ 21.9
MATR3P43243 MPP5-206ENST00000557237 479 ntTSL 421.91■■□□□ 1.16e-6■■■■□ 21.9
MATR3P43243 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.076e-6■■■■□ 21.9
MATR3P43243 ACTR10-202ENST00000545307 1602 ntTSL 521.69■■□□□ 1.066e-6■■■■□ 21.9
MATR3P43243 ZNF577-210ENST00000638827 1856 ntTSL 521.31■■□□□ 17e-7■■■■□ 21.9
MATR3P43243 PLD3-219ENST00000598962 580 ntTSL 421.21■□□□□ 0.996e-6■■■■□ 21.9
MATR3P43243 ACTR10-204ENST00000554402 1544 ntTSL 1 (best)21.16■□□□□ 0.986e-6■■■■□ 21.9
MATR3P43243 PLD3-216ENST00000594085 503 ntTSL 221.07■□□□□ 0.966e-6■■■■□ 21.9
MATR3P43243 PLD3-224ENST00000602131 503 ntTSL 221.07■□□□□ 0.966e-6■■■■□ 21.9
MATR3P43243 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.04■□□□□ 0.966e-6■■■■□ 21.9
MATR3P43243 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.936e-6■■■■□ 21.9
MATR3P43243 SPATA13-209ENST00000466831 2191 ntTSL 220.82■□□□□ 0.921e-8■■■■□ 21.9
MATR3P43243 ZZZ3-206ENST00000463166 587 ntTSL 220.76■□□□□ 0.916e-6■■■■□ 21.9
MATR3P43243 LHFPL2-205ENST00000512759 933 ntTSL 220.74■□□□□ 0.916e-6■■■■□ 21.9
MATR3P43243 ACTR10-207ENST00000555229 1517 ntTSL 520.26■□□□□ 0.836e-6■■■■□ 21.9
MATR3P43243 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.86e-6■■■■□ 21.9
MATR3P43243 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.01■□□□□ 0.796e-6■■■■□ 21.9
MATR3P43243 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.96■□□□□ 0.796e-6■■■■□ 21.9
MATR3P43243 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.766e-6■■■■□ 21.9
MATR3P43243 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.746e-6■■■■□ 21.9
MATR3P43243 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.726e-6■■■■□ 21.9
MATR3P43243 ACTR10-214ENST00000556748 603 ntTSL 319.47■□□□□ 0.716e-6■■■■□ 21.9
MATR3P43243 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.716e-6■■■■□ 21.9
MATR3P43243 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.38■□□□□ 0.692e-6■■■■□ 21.9
MATR3P43243 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.37■□□□□ 0.696e-6■■■■□ 21.9
MATR3P43243 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.696e-6■■■■□ 21.9
MATR3P43243 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.676e-6■■■■□ 21.9
MATR3P43243 TTC7A-206ENST00000441914 2418 ntTSL 1 (best)19.19■□□□□ 0.666e-6■■■■□ 21.9
MATR3P43243 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.636e-6■■■■□ 21.9
MATR3P43243 ARF1-207ENST00000477451 789 ntTSL 518.7■□□□□ 0.586e-6■■■■□ 21.9
MATR3P43243 SOX13-202ENST00000367203 3525 ntTSL 1 (best)18.61■□□□□ 0.576e-6■■■■□ 21.9
MATR3P43243 SOX13-206ENST00000525442 538 ntTSL 418.54■□□□□ 0.566e-6■■■■□ 21.9
MATR3P43243 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.557e-7■■■■□ 21.9
MATR3P43243 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.43■□□□□ 0.546e-6■■■■□ 21.9
MATR3P43243 TMEM106A-206ENST00000592564 568 ntTSL 518.4■□□□□ 0.546e-6■■■■□ 21.9
MATR3P43243 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.92■□□□□ 0.466e-6■■■■□ 21.9
MATR3P43243 ZNF251-202ENST00000524394 315 ntTSL 517.9■□□□□ 0.466e-6■■■■□ 21.9
MATR3P43243 TTC7A-210ENST00000484337 753 ntTSL 317.89■□□□□ 0.456e-6■■■■□ 21.9
MATR3P43243 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.456e-6■■■■□ 21.9
MATR3P43243 AC026412.1-204ENST00000507505 1009 ntTSL 1 (best)17.8■□□□□ 0.446e-6■■■■□ 21.9
MATR3P43243 PLD3-222ENST00000600479 477 ntTSL 417.69■□□□□ 0.426e-6■■■■□ 21.9
MATR3P43243 EFTUD2-215ENST00000589825 600 ntTSL 217.66■□□□□ 0.426e-6■■■■□ 21.9
MATR3P43243 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.46e-6■■■■□ 21.9
MATR3P43243 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.48■□□□□ 0.396e-6■■■■□ 21.9
MATR3P43243 TTC7A-204ENST00000409825 4739 ntTSL 1 (best)17.44■□□□□ 0.386e-6■■■■□ 21.9
MATR3P43243 PLD3-217ENST00000594908 804 ntTSL 317.2■□□□□ 0.346e-6■■■■□ 21.9
MATR3P43243 TMEM106A-207ENST00000592649 639 ntTSL 417.2■□□□□ 0.346e-6■■■■□ 21.9
Retrieved 100 of 16,209 protein–RNA pairs in 116.2 ms