RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 NISCHQ9Y2I1 1504 aa27.9■■■□□ 2.06
TTC7A-204ENST00000409825 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
TTC7A-204ENST00000409825 SUPT5HO00267 1087 aaKnown RBP25.4■■□□□ 1.66
TTC7A-204ENST00000409825 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
TTC7A-204ENST00000409825 ABCC9O60706 1549 aa24.39■■□□□ 1.5
TTC7A-204ENST00000409825 FAM9AQ8IZU1 332 aaPredicted RBP24.34■■□□□ 1.49
TTC7A-204ENST00000409825 EHMT2Q96KQ7 1210 aa24.07■■□□□ 1.44
TTC7A-204ENST00000409825 APLP2Q06481 763 aa24.01■■□□□ 1.43
TTC7A-204ENST00000409825 PABPN1Q86U42 306 aaKnown RBP eCLIP23.83■■□□□ 1.41
TTC7A-204ENST00000409825 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
TTC7A-204ENST00000409825 RANGAP1P46060 587 aaPredicted RBP23.47■■□□□ 1.35
TTC7A-204ENST00000409825 UBTFP17480 764 aaKnown RBP23.44■■□□□ 1.34
TTC7A-204ENST00000409825 CCDC180Q9P1Z9 1646 aa23.43■■□□□ 1.34
TTC7A-204ENST00000409825 ATP1B4Q9UN42 357 aaPredicted RBP23.41■■□□□ 1.34
TTC7A-204ENST00000409825 TTBK1Q5TCY1 1321 aaPredicted RBP23.1■■□□□ 1.29
TTC7A-204ENST00000409825 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
TTC7A-204ENST00000409825 RB1CC1Q8TDY2 1594 aa23.03■■□□□ 1.28
TTC7A-204ENST00000409825 SCRIBQ14160 1630 aa23.03■■□□□ 1.28
TTC7A-204ENST00000409825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.96■■□□□ 1.27
TTC7A-204ENST00000409825 HNRNPUL2Q1KMD3 747 aaKnown RBP22.96■■□□□ 1.27
TTC7A-204ENST00000409825 NACADO15069 1562 aa22.82■■□□□ 1.24
TTC7A-204ENST00000409825 MYT1LQ9UL68 1186 aa22.79■■□□□ 1.24
TTC7A-204ENST00000409825 FBLN2P98095 1184 aa22.7■■□□□ 1.23
TTC7A-204ENST00000409825 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
TTC7A-204ENST00000409825 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.2
TTC7A-204ENST00000409825 CCER1Q8TC90 406 aaPredicted RBP22.42■■□□□ 1.18
TTC7A-204ENST00000409825 DCAF1Q9Y4B6 1507 aa22.33■■□□□ 1.17
TTC7A-204ENST00000409825 ITGAEP38570 1179 aa22.31■■□□□ 1.16
TTC7A-204ENST00000409825 PPARGC1BQ86YN6 1023 aaKnown RBP22.3■■□□□ 1.16
TTC7A-204ENST00000409825 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
TTC7A-204ENST00000409825 ZEB1P37275 1124 aaPredicted RBP22.28■■□□□ 1.16
TTC7A-204ENST00000409825 CSRNP3Q8WYN3 585 aa22.19■■□□□ 1.14
TTC7A-204ENST00000409825 BAZ1BQ9UIG0 1483 aaKnown RBP22.17■■□□□ 1.14
TTC7A-204ENST00000409825 NPM1P06748 294 aaKnown RBP eCLIP22.15■■□□□ 1.14
TTC7A-204ENST00000409825 CDK11AQ9UQ88 783 aaPredicted RBP22.08■■□□□ 1.13
TTC7A-204ENST00000409825 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
TTC7A-204ENST00000409825 CHMP7Q8WUX9 453 aaPredicted RBP22.05■■□□□ 1.12
TTC7A-204ENST00000409825 FAM50AQ14320 339 aaKnown RBP22.03■■□□□ 1.12
TTC7A-204ENST00000409825 ERCC6Q03468 1493 aa22.03■■□□□ 1.12
TTC7A-204ENST00000409825 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
TTC7A-204ENST00000409825 P3H3Q8IVL6 736 aa22■■□□□ 1.11
TTC7A-204ENST00000409825 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
TTC7A-204ENST00000409825 MYO15BQ96JP2 1530 aa21.98■■□□□ 1.11
TTC7A-204ENST00000409825 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
TTC7A-204ENST00000409825 ARID3CA6NKF2 412 aa21.89■■□□□ 1.09
TTC7A-204ENST00000409825 TRIM52Q96A61 297 aa21.85■■□□□ 1.09
TTC7A-204ENST00000409825 ESF1Q9H501 851 aaKnown RBP21.78■■□□□ 1.08
TTC7A-204ENST00000409825 CECR2Q9BXF3 1484 aa21.76■■□□□ 1.07
TTC7A-204ENST00000409825 ZNF777Q9ULD5 760 aaPredicted RBP21.74■■□□□ 1.07
TTC7A-204ENST00000409825 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
TTC7A-204ENST00000409825 POLR3GLQ9BT43 218 aa21.71■■□□□ 1.07
TTC7A-204ENST00000409825 WRNQ14191 1432 aaPredicted RBP eCLIP21.68■■□□□ 1.06
TTC7A-204ENST00000409825 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
TTC7A-204ENST00000409825 KIF27Q86VH2 1401 aa21.59■■□□□ 1.05
TTC7A-204ENST00000409825 EEA1Q15075 1411 aa21.58■■□□□ 1.05
TTC7A-204ENST00000409825 SLC4A1APQ9BWU0 796 aaKnown RBP21.58■■□□□ 1.05
TTC7A-204ENST00000409825 BCANQ96GW7 911 aa21.53■■□□□ 1.04
TTC7A-204ENST00000409825 CENPBP07199 599 aaPredicted RBP21.51■■□□□ 1.03
TTC7A-204ENST00000409825 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
TTC7A-204ENST00000409825 PLEKHD1A6NEE1 506 aa21.45■■□□□ 1.02
TTC7A-204ENST00000409825 TSPY4P0CV99 314 aa21.43■■□□□ 1.02
TTC7A-204ENST00000409825 TSPY10P0CW01 314 aa21.43■■□□□ 1.02
TTC7A-204ENST00000409825 MTUS2Q5JR59 1369 aa21.42■■□□□ 1.02
TTC7A-204ENST00000409825 STAG3Q9UJ98 1225 aa21.41■■□□□ 1.02
TTC7A-204ENST00000409825 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
TTC7A-204ENST00000409825 NEUROD1Q13562 356 aa21.38■■□□□ 1.01
TTC7A-204ENST00000409825 ZNF326Q5BKZ1 582 aaKnown RBP21.37■■□□□ 1.01
TTC7A-204ENST00000409825 KCNH8Q96L42 1107 aa21.37■■□□□ 1.01
TTC7A-204ENST00000409825 ATAD2BQ9ULI0 1458 aa21.36■■□□□ 1.01
TTC7A-204ENST00000409825 CLIP1P30622 1438 aa21.33■■□□□ 1
TTC7A-204ENST00000409825 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
TTC7A-204ENST00000409825 NEFLP07196 543 aa21.31■■□□□ 1
TTC7A-204ENST00000409825 GOLGA3Q08378 1498 aa21.31■■□□□ 1
TTC7A-204ENST00000409825 PLPPR3Q6T4P5 718 aa21.3■■□□□ 1
TTC7A-204ENST00000409825 CUX2O14529 1486 aa21.3■■□□□ 1
TTC7A-204ENST00000409825 CNGB1Q14028 1251 aaPredicted RBP21.26■□□□□ 0.99
TTC7A-204ENST00000409825 CHGAP10645 457 aaKnown RBP21.26■□□□□ 0.99
TTC7A-204ENST00000409825 CEP164Q9UPV0 1460 aa21.25■□□□□ 0.99
TTC7A-204ENST00000409825 SOGA1O94964 1423 aa21.25■□□□□ 0.99
TTC7A-204ENST00000409825 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
TTC7A-204ENST00000409825 TOP2AP11388 1531 aaKnown RBP21.23■□□□□ 0.99
TTC7A-204ENST00000409825 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
TTC7A-204ENST00000409825 SMARCA4P51532 1647 aa21.18■□□□□ 0.98
TTC7A-204ENST00000409825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.17■□□□□ 0.982e-6■■□□□ 11.5
TTC7A-204ENST00000409825 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
TTC7A-204ENST00000409825 CHIC2Q9UKJ5 165 aa21.15■□□□□ 0.98
TTC7A-204ENST00000409825 CARMIL2Q6F5E8 1435 aa21.13■□□□□ 0.97
TTC7A-204ENST00000409825 ARID4BQ4LE39 1312 aaPredicted RBP21.12■□□□□ 0.97
TTC7A-204ENST00000409825 HRCP23327 699 aa21.12■□□□□ 0.97
TTC7A-204ENST00000409825 CFDP1Q9UEE9 299 aaPredicted RBP21.11■□□□□ 0.97
TTC7A-204ENST00000409825 YTHDC1Q96MU7 727 aaKnown RBP21.1■□□□□ 0.97
TTC7A-204ENST00000409825 ABCC8Q09428 1581 aa21.09■□□□□ 0.97
TTC7A-204ENST00000409825 EIF4G1Q04637 1599 aaKnown RBP21.08■□□□□ 0.96
TTC7A-204ENST00000409825 ACIN1Q9UKV3 1341 aaKnown RBP21.07■□□□□ 0.96
TTC7A-204ENST00000409825 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
TTC7A-204ENST00000409825 WIZO95785 1651 aa21.06■□□□□ 0.96
TTC7A-204ENST00000409825 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
TTC7A-204ENST00000409825 TNIKQ9UKE5 1360 aa21.05■□□□□ 0.96
TTC7A-204ENST00000409825 CEP162Q5TB80 1403 aa21.02■□□□□ 0.96
TTC7A-204ENST00000409825 FHAD1B1AJZ9 1412 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms