RNA–Protein interactions for RNA: ENST00000555229.5

ACTR10-207, Transcript of actin related protein 10 homolog, humanhuman

TSL 5

Gene ACTR10, Length 1,517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR10-207ENST00000555229 NISCHQ9Y2I1 1504 aa44.46■■■■■ 4.71
ACTR10-207ENST00000555229 CCDC180Q9P1Z9 1646 aa39.33■■■■□ 3.89
ACTR10-207ENST00000555229 ABCC9O60706 1549 aa38.14■■■■□ 3.7
ACTR10-207ENST00000555229 ZCCHC6Q5VYS8 1495 aaKnown RBP37.1■■■■□ 3.53
ACTR10-207ENST00000555229 DCAF8L2P0C7V8 631 aa36.98■■■■□ 3.51
ACTR10-207ENST00000555229 NACADO15069 1562 aa36.89■■■■□ 3.5
ACTR10-207ENST00000555229 RB1CC1Q8TDY2 1594 aa36.83■■■■□ 3.49
ACTR10-207ENST00000555229 MYO15BQ96JP2 1530 aa36.81■■■■□ 3.48
ACTR10-207ENST00000555229 DCAF1Q9Y4B6 1507 aa36.8■■■■□ 3.48
ACTR10-207ENST00000555229 UNC13AQ9UPW8 1703 aa36.08■■■■□ 3.37
ACTR10-207ENST00000555229 SCRIBQ14160 1630 aa35.92■■■■□ 3.34
ACTR10-207ENST00000555229 BICRAQ9NZM4 1560 aa35.76■■■■□ 3.31
ACTR10-207ENST00000555229 PABPN1Q86U42 306 aaKnown RBP eCLIP35.73■■■■□ 3.31
ACTR10-207ENST00000555229 SHROOM4Q9ULL8 1493 aa35.34■■■■□ 3.25
ACTR10-207ENST00000555229 EIF4G1Q04637 1599 aaKnown RBP34.75■■■■□ 3.15
ACTR10-207ENST00000555229 DNAJC5BQ9UF47 199 aa34.74■■■■□ 3.15
ACTR10-207ENST00000555229 CECR2Q9BXF3 1484 aa34.62■■■■□ 3.13
ACTR10-207ENST00000555229 CC2D2AQ9P2K1 1620 aa34.53■■■■□ 3.12
ACTR10-207ENST00000555229 SMARCA4P51532 1647 aa34.41■■■■□ 3.1
ACTR10-207ENST00000555229 BAZ1AQ9NRL2 1556 aaPredicted RBP34.4■■■■□ 3.1
ACTR10-207ENST00000555229 MROH2BQ7Z745 1585 aa34.28■■■■□ 3.08
ACTR10-207ENST00000555229 ATAD2BQ9ULI0 1458 aa34.14■■■■□ 3.06
ACTR10-207ENST00000555229 SMARCA2P51531 1590 aa34.08■■■■□ 3.05
ACTR10-207ENST00000555229 PEG3Q9GZU2 1588 aa34.08■■■■□ 3.05
ACTR10-207ENST00000555229 NCAPD3P42695 1498 aa34.06■■■■□ 3.04
ACTR10-207ENST00000555229 RSF1Q96T23 1441 aaPredicted RBP34.03■■■■□ 3.04
ACTR10-207ENST00000555229 WIZO95785 1651 aa33.93■■■■□ 3.02
ACTR10-207ENST00000555229 HMGXB3Q12766 1538 aa33.9■■■■□ 3.02
ACTR10-207ENST00000555229 BAZ1BQ9UIG0 1483 aaKnown RBP33.84■■■■□ 3.01
ACTR10-207ENST00000555229 TOP2AP11388 1531 aaKnown RBP33.56■■■□□ 2.96
ACTR10-207ENST00000555229 SUPT5HO00267 1087 aaKnown RBP33.43■■■□□ 2.94
ACTR10-207ENST00000555229 CCDC88BA6NC98 1476 aa33.19■■■□□ 2.9
ACTR10-207ENST00000555229 NESP48681 1621 aa33.14■■■□□ 2.9
ACTR10-207ENST00000555229 CADPSQ9ULU8 1353 aa33.09■■■□□ 2.89
ACTR10-207ENST00000555229 LAMC3Q9Y6N6 1575 aa33.08■■■□□ 2.89
ACTR10-207ENST00000555229 CFTRP13569 1480 aa32.98■■■□□ 2.87
ACTR10-207ENST00000555229 PDS5BQ9NTI5 1447 aa32.84■■■□□ 2.85
ACTR10-207ENST00000555229 ERCC6Q03468 1493 aa32.8■■■□□ 2.84
ACTR10-207ENST00000555229 KIF21AQ7Z4S6 1674 aa32.75■■■□□ 2.83
ACTR10-207ENST00000555229 PRDM2Q13029 1718 aa32.75■■■□□ 2.83
ACTR10-207ENST00000555229 FANCD2Q9BXW9 1451 aa32.7■■■□□ 2.82
ACTR10-207ENST00000555229 CEP164Q9UPV0 1460 aa32.6■■■□□ 2.81
ACTR10-207ENST00000555229 THOC2Q8NI27 1593 aaKnown RBP32.53■■■□□ 2.8
ACTR10-207ENST00000555229 MRC2Q9UBG0 1479 aa32.48■■■□□ 2.79
ACTR10-207ENST00000555229 WDR62O43379 1518 aa32.38■■■□□ 2.77
ACTR10-207ENST00000555229 URB2Q14146 1524 aaKnown RBP32.36■■■□□ 2.77
ACTR10-207ENST00000555229 CUX2O14529 1486 aa32.34■■■□□ 2.77
ACTR10-207ENST00000555229 TOPBP1Q92547 1522 aa32.22■■■□□ 2.75
ACTR10-207ENST00000555229 ABCC8Q09428 1581 aa32.22■■■□□ 2.75
ACTR10-207ENST00000555229 DNMBPQ6XZF7 1577 aa32.2■■■□□ 2.75
ACTR10-207ENST00000555229 CUX1P39880 1505 aa32.13■■■□□ 2.73
ACTR10-207ENST00000555229 WRNQ14191 1432 aaPredicted RBP eCLIP32.05■■■□□ 2.72
ACTR10-207ENST00000555229 POLA1P09884 1462 aaPredicted RBP31.98■■■□□ 2.71
ACTR10-207ENST00000555229 SYNJ1O43426 1573 aa31.96■■■□□ 2.71
ACTR10-207ENST00000555229 TOP2BQ02880 1626 aa31.95■■■□□ 2.7
ACTR10-207ENST00000555229 FGD5Q6ZNL6 1462 aa31.94■■■□□ 2.7
ACTR10-207ENST00000555229 BIVM-ERCC5R4GMW8 1640 aa31.93■■■□□ 2.7
ACTR10-207ENST00000555229 IFT140Q96RY7 1462 aa31.91■■■□□ 2.7
ACTR10-207ENST00000555229 TARBP1Q13395 1621 aaKnown RBP31.85■■■□□ 2.69
ACTR10-207ENST00000555229 SOGA1O94964 1423 aa31.85■■■□□ 2.69
ACTR10-207ENST00000555229 RAD54L2Q9Y4B4 1467 aa31.84■■■□□ 2.69
ACTR10-207ENST00000555229 ZNF608Q9ULD9 1512 aaPredicted RBP31.76■■■□□ 2.68
ACTR10-207ENST00000555229 WDR97A6NE52 1622 aa31.67■■■□□ 2.66
ACTR10-207ENST00000555229 ABCA10Q8WWZ4 1543 aa31.67■■■□□ 2.66
ACTR10-207ENST00000555229 AQRO60306 1485 aaKnown RBP eCLIP31.64■■■□□ 2.66
ACTR10-207ENST00000555229 TDRD9Q8NDG6 1382 aaKnown RBP31.63■■■□□ 2.65
ACTR10-207ENST00000555229 EIF4G3O43432 1585 aaKnown RBP31.63■■■□□ 2.65
ACTR10-207ENST00000555229 TRIM41Q8WV44 630 aa31.55■■■□□ 2.64
ACTR10-207ENST00000555229 ABCA5Q8WWZ7 1642 aa31.5■■■□□ 2.63
ACTR10-207ENST00000555229 GAPVD1Q14C86 1478 aa31.48■■■□□ 2.63
ACTR10-207ENST00000555229 CHIC1Q5VXU3 224 aa31.45■■■□□ 2.63
ACTR10-207ENST00000555229 GRIN2BQ13224 1484 aa31.42■■■□□ 2.62
ACTR10-207ENST00000555229 PBRM1Q86U86 1689 aa31.39■■■□□ 2.62
ACTR10-207ENST00000555229 KIF27Q86VH2 1401 aa31.34■■■□□ 2.61
ACTR10-207ENST00000555229 SNAPC4Q5SXM2 1469 aa31.32■■■□□ 2.6
ACTR10-207ENST00000555229 MAGI1Q96QZ7 1491 aaPredicted RBP31.29■■■□□ 2.6
ACTR10-207ENST00000555229 ERICH3Q5RHP9 1530 aa31.27■■■□□ 2.6
ACTR10-207ENST00000555229 RUSC2Q8N2Y8 1516 aa31.22■■■□□ 2.59
ACTR10-207ENST00000555229 IGF1RP08069 1367 aa31.21■■■□□ 2.59
ACTR10-207ENST00000555229 CHD1O14646 1710 aa31.18■■■□□ 2.58
ACTR10-207ENST00000555229 SYNJ2O15056 1496 aa31.17■■■□□ 2.58
ACTR10-207ENST00000555229 ADAMTS12P58397 1594 aa31.15■■■□□ 2.58
ACTR10-207ENST00000555229 FBLN2P98095 1184 aa31.15■■■□□ 2.58
ACTR10-207ENST00000555229 CHMP7Q8WUX9 453 aaPredicted RBP31.14■■■□□ 2.57
ACTR10-207ENST00000555229 FHAD1B1AJZ9 1412 aa31.13■■■□□ 2.57
ACTR10-207ENST00000555229 OSCARQ8IYS5 282 aa31.09■■■□□ 2.57
ACTR10-207ENST00000555229 CUL7Q14999 1698 aa31.05■■■□□ 2.56
ACTR10-207ENST00000555229 GRIN2AQ12879 1464 aa31.02■■■□□ 2.56
ACTR10-207ENST00000555229 CARMIL1Q5VZK9 1371 aa31.01■■■□□ 2.55
ACTR10-207ENST00000555229 EEA1Q15075 1411 aa30.98■■■□□ 2.55
ACTR10-207ENST00000555229 DNAJC5Q9H3Z4 198 aa30.96■■■□□ 2.55
ACTR10-207ENST00000555229 CSRNP3Q8WYN3 585 aa30.93■■■□□ 2.54
ACTR10-207ENST00000555229 FAM9AQ8IZU1 332 aaPredicted RBP30.89■■■□□ 2.54
ACTR10-207ENST00000555229 NUP160Q12769 1436 aa30.88■■■□□ 2.53
ACTR10-207ENST00000555229 PRXQ9BXM0 1461 aa30.87■■■□□ 2.53
ACTR10-207ENST00000555229 CEP170Q5SW79 1584 aa30.86■■■□□ 2.53
ACTR10-207ENST00000555229 RAPGEF2Q9Y4G8 1499 aa30.85■■■□□ 2.53
ACTR10-207ENST00000555229 CLASP1Q7Z460 1538 aa30.84■■■□□ 2.53
ACTR10-207ENST00000555229 KIAA0586Q9BVV6 1533 aa30.67■■■□□ 2.5
ACTR10-207ENST00000555229 KIF21BO75037 1637 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms