Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB1P01920 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 AC061975.6-201ENST00000579045 1553 ntBASIC17.36■□□□□ 0.37
HLA-DQB1P01920 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 AC005224.4-201ENST00000583262 1652 ntBASIC17.36■□□□□ 0.37
HLA-DQB1P01920 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 AC131281.2-201ENST00000520478 145 ntBASIC17.36■□□□□ 0.37
HLA-DQB1P01920 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DQB1P01920 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 CROCCP3-202ENST00000420820 1947 ntBASIC17.35■□□□□ 0.37
HLA-DQB1P01920 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 MIR2861-201ENST00000636310 90 ntBASIC17.35■□□□□ 0.37
HLA-DQB1P01920 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DQB1P01920 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms