Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
LTN1O94822 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
LTN1O94822 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
LTN1O94822 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
LTN1O94822 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
LTN1O94822 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
LTN1O94822 C1QL1P1-201ENST00000568105 661 ntBASIC26.91■■□□□ 1.9
LTN1O94822 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
LTN1O94822 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LTN1O94822 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LTN1O94822 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
LTN1O94822 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
LTN1O94822 FBXW4P1-201ENST00000426721 2239 ntBASIC26.9■■□□□ 1.9
LTN1O94822 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC26.9■■□□□ 1.9
LTN1O94822 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LTN1O94822 UNC93B2-201ENST00000285383 730 ntBASIC26.9■■□□□ 1.9
LTN1O94822 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LTN1O94822 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC26.9■■□□□ 1.9
LTN1O94822 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC26.9■■□□□ 1.9
LTN1O94822 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC26.9■■□□□ 1.9
LTN1O94822 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LTN1O94822 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.9■■□□□ 1.9
LTN1O94822 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
LTN1O94822 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
LTN1O94822 TMPOP1-202ENST00000424642 1267 ntBASIC26.89■■□□□ 1.9
LTN1O94822 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
LTN1O94822 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
LTN1O94822 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
LTN1O94822 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
LTN1O94822 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.89■■□□□ 1.89
LTN1O94822 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
LTN1O94822 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
LTN1O94822 AL355355.2-201ENST00000442321 338 ntBASIC26.89■■□□□ 1.89
LTN1O94822 TK2-213ENST00000563369 882 ntTSL 5 BASIC26.89■■□□□ 1.89
LTN1O94822 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.89
LTN1O94822 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
LTN1O94822 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC26.88■■□□□ 1.89
LTN1O94822 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC26.88■■□□□ 1.89
LTN1O94822 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LTN1O94822 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC26.88■■□□□ 1.89
LTN1O94822 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LTN1O94822 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
LTN1O94822 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
LTN1O94822 DUT-205ENST00000558813 769 ntTSL 2 BASIC26.88■■□□□ 1.89
LTN1O94822 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
LTN1O94822 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LTN1O94822 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LTN1O94822 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC26.88■■□□□ 1.89
LTN1O94822 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
LTN1O94822 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC26.88■■□□□ 1.89
LTN1O94822 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
LTN1O94822 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
LTN1O94822 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC26.87■■□□□ 1.89
LTN1O94822 AC004264.1-201ENST00000608354 794 ntBASIC26.87■■□□□ 1.89
LTN1O94822 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
LTN1O94822 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
LTN1O94822 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LTN1O94822 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC26.87■■□□□ 1.89
LTN1O94822 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LTN1O94822 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
LTN1O94822 AL121603.2-201ENST00000557373 2117 ntBASIC26.87■■□□□ 1.89
LTN1O94822 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
LTN1O94822 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC26.86■■□□□ 1.89
LTN1O94822 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
LTN1O94822 AC073195.1-201ENST00000607241 877 ntBASIC26.86■■□□□ 1.89
LTN1O94822 AP000525.1-201ENST00000608286 694 ntBASIC26.86■■□□□ 1.89
LTN1O94822 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.86■■□□□ 1.89
LTN1O94822 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
LTN1O94822 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
LTN1O94822 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
LTN1O94822 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
LTN1O94822 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
LTN1O94822 AC113347.1-201ENST00000413321 391 ntBASIC26.86■■□□□ 1.89
LTN1O94822 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC26.86■■□□□ 1.89
LTN1O94822 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
LTN1O94822 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
LTN1O94822 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC26.86■■□□□ 1.89
LTN1O94822 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
LTN1O94822 AC145285.6-201ENST00000604632 637 ntBASIC26.86■■□□□ 1.89
LTN1O94822 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
LTN1O94822 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
LTN1O94822 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC26.85■■□□□ 1.89
LTN1O94822 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
LTN1O94822 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
LTN1O94822 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
LTN1O94822 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC26.85■■□□□ 1.89
LTN1O94822 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
LTN1O94822 AC116562.2-201ENST00000507042 360 ntBASIC26.85■■□□□ 1.89
LTN1O94822 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
LTN1O94822 KRT8P20-201ENST00000423953 1409 ntBASIC26.85■■□□□ 1.89
LTN1O94822 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
LTN1O94822 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LTN1O94822 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC26.84■■□□□ 1.89
LTN1O94822 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LTN1O94822 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LTN1O94822 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
LTN1O94822 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC26.84■■□□□ 1.89
LTN1O94822 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LTN1O94822 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
LTN1O94822 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms