Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
OPHN1O60890 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
OPHN1O60890 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 AC098590.1-201ENST00000468126 897 ntBASIC20.93■□□□□ 0.94
OPHN1O60890 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.93■□□□□ 0.94
OPHN1O60890 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.93■□□□□ 0.94
OPHN1O60890 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.93■□□□□ 0.94
OPHN1O60890 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.93■□□□□ 0.94
OPHN1O60890 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.93■□□□□ 0.94
OPHN1O60890 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.93■□□□□ 0.94
OPHN1O60890 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.93■□□□□ 0.94
OPHN1O60890 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.93■□□□□ 0.94
OPHN1O60890 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
OPHN1O60890 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.93■□□□□ 0.94
OPHN1O60890 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.92■□□□□ 0.94
OPHN1O60890 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
OPHN1O60890 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.92■□□□□ 0.94
OPHN1O60890 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
OPHN1O60890 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
OPHN1O60890 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
OPHN1O60890 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
OPHN1O60890 ESRRAP1-201ENST00000400596 1257 ntBASIC20.92■□□□□ 0.94
OPHN1O60890 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.92■□□□□ 0.94
OPHN1O60890 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.92■□□□□ 0.94
OPHN1O60890 AC007322.3-201ENST00000426526 701 ntBASIC20.92■□□□□ 0.94
OPHN1O60890 AC093787.1-201ENST00000450396 207 ntBASIC20.92■□□□□ 0.94
OPHN1O60890 AC097658.1-201ENST00000475555 843 ntBASIC20.92■□□□□ 0.94
OPHN1O60890 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.92■□□□□ 0.94
OPHN1O60890 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
OPHN1O60890 AC016405.3-201ENST00000607710 860 ntBASIC20.92■□□□□ 0.94
OPHN1O60890 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
OPHN1O60890 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
OPHN1O60890 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
OPHN1O60890 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
OPHN1O60890 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
OPHN1O60890 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.92■□□□□ 0.94
OPHN1O60890 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
OPHN1O60890 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
OPHN1O60890 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
OPHN1O60890 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
OPHN1O60890 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
OPHN1O60890 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.91■□□□□ 0.94
OPHN1O60890 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
OPHN1O60890 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
OPHN1O60890 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
OPHN1O60890 BX276092.2-201ENST00000417668 665 ntBASIC20.91■□□□□ 0.94
OPHN1O60890 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
OPHN1O60890 GCSHP5-201ENST00000443090 522 ntBASIC20.91■□□□□ 0.94
OPHN1O60890 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
OPHN1O60890 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.91■□□□□ 0.94
OPHN1O60890 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
OPHN1O60890 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.91■□□□□ 0.94
OPHN1O60890 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
OPHN1O60890 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.91■□□□□ 0.94
OPHN1O60890 MIR2861-201ENST00000636310 90 ntBASIC20.91■□□□□ 0.94
OPHN1O60890 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
OPHN1O60890 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
OPHN1O60890 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
OPHN1O60890 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
OPHN1O60890 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.9■□□□□ 0.94
OPHN1O60890 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
OPHN1O60890 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OPHN1O60890 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
OPHN1O60890 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
OPHN1O60890 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
OPHN1O60890 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OPHN1O60890 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.9■□□□□ 0.94
OPHN1O60890 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.9■□□□□ 0.94
OPHN1O60890 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.9■□□□□ 0.94
OPHN1O60890 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.9■□□□□ 0.94
OPHN1O60890 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.9■□□□□ 0.94
OPHN1O60890 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
OPHN1O60890 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OPHN1O60890 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
OPHN1O60890 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OPHN1O60890 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
OPHN1O60890 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
OPHN1O60890 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
OPHN1O60890 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
OPHN1O60890 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
OPHN1O60890 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
OPHN1O60890 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.89■□□□□ 0.93
OPHN1O60890 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
OPHN1O60890 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
OPHN1O60890 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
OPHN1O60890 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
OPHN1O60890 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
OPHN1O60890 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
OPHN1O60890 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
OPHN1O60890 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
OPHN1O60890 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms