Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFS4O43181 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFS4O43181 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
NDUFS4O43181 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS4O43181 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NDUFS4O43181 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.28■□□□□ 0.68
NDUFS4O43181 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS4O43181 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS4O43181 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS4O43181 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS4O43181 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.28■□□□□ 0.68
NDUFS4O43181 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS4O43181 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NDUFS4O43181 SMG8-203ENST00000578922 2178 ntBASIC19.28■□□□□ 0.68
NDUFS4O43181 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.28■□□□□ 0.68
NDUFS4O43181 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NDUFS4O43181 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS4O43181 AL162377.1-201ENST00000618844 1793 ntBASIC19.28■□□□□ 0.68
NDUFS4O43181 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS4O43181 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
NDUFS4O43181 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS4O43181 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS4O43181 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.28■□□□□ 0.68
NDUFS4O43181 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NDUFS4O43181 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NDUFS4O43181 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NDUFS4O43181 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NDUFS4O43181 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NDUFS4O43181 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NDUFS4O43181 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.27■□□□□ 0.68
NDUFS4O43181 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NDUFS4O43181 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.27■□□□□ 0.68
NDUFS4O43181 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NDUFS4O43181 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.27■□□□□ 0.68
NDUFS4O43181 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.27■□□□□ 0.68
NDUFS4O43181 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NDUFS4O43181 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.27■□□□□ 0.68
NDUFS4O43181 AC073210.2-201ENST00000430369 194 ntBASIC19.27■□□□□ 0.68
NDUFS4O43181 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.27■□□□□ 0.68
NDUFS4O43181 AC097658.1-201ENST00000475555 843 ntBASIC19.27■□□□□ 0.68
NDUFS4O43181 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NDUFS4O43181 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NDUFS4O43181 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.27■□□□□ 0.68
NDUFS4O43181 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.27■□□□□ 0.68
NDUFS4O43181 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.27■□□□□ 0.68
NDUFS4O43181 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NDUFS4O43181 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NDUFS4O43181 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NDUFS4O43181 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
NDUFS4O43181 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
NDUFS4O43181 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NDUFS4O43181 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFS4O43181 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFS4O43181 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFS4O43181 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFS4O43181 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.26■□□□□ 0.67
NDUFS4O43181 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFS4O43181 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFS4O43181 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.26■□□□□ 0.67
NDUFS4O43181 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.26■□□□□ 0.67
NDUFS4O43181 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFS4O43181 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
NDUFS4O43181 MYC-209ENST00000641252 345 ntBASIC19.26■□□□□ 0.67
NDUFS4O43181 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
NDUFS4O43181 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
NDUFS4O43181 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFS4O43181 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NDUFS4O43181 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.26■□□□□ 0.67
NDUFS4O43181 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS4O43181 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NDUFS4O43181 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.25■□□□□ 0.67
NDUFS4O43181 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.25■□□□□ 0.67
NDUFS4O43181 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NDUFS4O43181 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS4O43181 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS4O43181 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS4O43181 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NDUFS4O43181 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS4O43181 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS4O43181 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.25■□□□□ 0.67
NDUFS4O43181 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS4O43181 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.25■□□□□ 0.67
NDUFS4O43181 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NDUFS4O43181 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.25■□□□□ 0.67
NDUFS4O43181 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS4O43181 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS4O43181 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS4O43181 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS4O43181 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS4O43181 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NDUFS4O43181 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS4O43181 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS4O43181 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS4O43181 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS4O43181 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS4O43181 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NDUFS4O43181 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS4O43181 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NDUFS4O43181 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.24■□□□□ 0.67
NDUFS4O43181 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms