Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NDUFA1O15239 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA1O15239 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA1O15239 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.74□□□□□ -0.21
NDUFA1O15239 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NDUFA1O15239 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA1O15239 RASA4CP-201ENST00000424092 1398 ntBASIC13.74□□□□□ -0.21
NDUFA1O15239 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.74□□□□□ -0.21
NDUFA1O15239 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA1O15239 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.74□□□□□ -0.21
NDUFA1O15239 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NDUFA1O15239 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NDUFA1O15239 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA1O15239 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA1O15239 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA1O15239 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.74□□□□□ -0.21
NDUFA1O15239 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.74□□□□□ -0.21
NDUFA1O15239 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.74□□□□□ -0.21
NDUFA1O15239 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.74□□□□□ -0.21
NDUFA1O15239 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC13.74□□□□□ -0.21
NDUFA1O15239 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA1O15239 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA1O15239 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA1O15239 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.74□□□□□ -0.21
NDUFA1O15239 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA1O15239 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA1O15239 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.73□□□□□ -0.21
NDUFA1O15239 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC13.73□□□□□ -0.21
NDUFA1O15239 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.73□□□□□ -0.21
NDUFA1O15239 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.73□□□□□ -0.21
NDUFA1O15239 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NDUFA1O15239 RNF146-206ENST00000480444 843 ntTSL 2 BASIC13.73□□□□□ -0.21
NDUFA1O15239 AP001330.3-201ENST00000520123 633 ntBASIC13.73□□□□□ -0.21
NDUFA1O15239 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.73□□□□□ -0.21
NDUFA1O15239 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NDUFA1O15239 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.73□□□□□ -0.21
NDUFA1O15239 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
NDUFA1O15239 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA1O15239 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NDUFA1O15239 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.72□□□□□ -0.21
NDUFA1O15239 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NDUFA1O15239 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.72□□□□□ -0.21
NDUFA1O15239 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.72□□□□□ -0.21
NDUFA1O15239 AC091305.1-201ENST00000479476 895 ntBASIC13.72□□□□□ -0.21
NDUFA1O15239 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC13.72□□□□□ -0.21
NDUFA1O15239 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
NDUFA1O15239 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 AC090340.1-201ENST00000620778 4980 ntBASIC13.72□□□□□ -0.21
NDUFA1O15239 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.72□□□□□ -0.21
NDUFA1O15239 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.72□□□□□ -0.21
NDUFA1O15239 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.72□□□□□ -0.21
NDUFA1O15239 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA1O15239 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NDUFA1O15239 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.71□□□□□ -0.21
NDUFA1O15239 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NDUFA1O15239 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
NDUFA1O15239 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NDUFA1O15239 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.71□□□□□ -0.21
NDUFA1O15239 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NDUFA1O15239 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NDUFA1O15239 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.71□□□□□ -0.21
NDUFA1O15239 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.71□□□□□ -0.21
NDUFA1O15239 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NDUFA1O15239 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms