Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ELL3Q9HB65 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.55■□□□□ 0.4
ELL3Q9HB65 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.55■□□□□ 0.4
ELL3Q9HB65 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ELL3Q9HB65 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.55■□□□□ 0.4
ELL3Q9HB65 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ELL3Q9HB65 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.55■□□□□ 0.4
ELL3Q9HB65 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
ELL3Q9HB65 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.54■□□□□ 0.4
ELL3Q9HB65 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.54■□□□□ 0.4
ELL3Q9HB65 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
ELL3Q9HB65 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.54■□□□□ 0.4
ELL3Q9HB65 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 KRT18P5-201ENST00000436075 1291 ntBASIC17.54■□□□□ 0.4
ELL3Q9HB65 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.54■□□□□ 0.4
ELL3Q9HB65 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.54■□□□□ 0.4
ELL3Q9HB65 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.54■□□□□ 0.4
ELL3Q9HB65 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.54■□□□□ 0.4
ELL3Q9HB65 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.54■□□□□ 0.4
ELL3Q9HB65 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.54■□□□□ 0.4
ELL3Q9HB65 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
ELL3Q9HB65 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ELL3Q9HB65 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ELL3Q9HB65 AL512408.1-201ENST00000569378 2000 ntBASIC17.54■□□□□ 0.4
ELL3Q9HB65 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ELL3Q9HB65 AFG3L1P-217ENST00000557444 2447 ntBASIC17.53■□□□□ 0.4
ELL3Q9HB65 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ELL3Q9HB65 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ELL3Q9HB65 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ELL3Q9HB65 AC092720.2-201ENST00000602388 1665 ntBASIC17.53■□□□□ 0.4
ELL3Q9HB65 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ELL3Q9HB65 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ELL3Q9HB65 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
ELL3Q9HB65 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ELL3Q9HB65 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ELL3Q9HB65 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ELL3Q9HB65 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.53■□□□□ 0.4
ELL3Q9HB65 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ELL3Q9HB65 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.53■□□□□ 0.4
ELL3Q9HB65 AL162430.1-201ENST00000480705 870 ntBASIC17.53■□□□□ 0.4
ELL3Q9HB65 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.53■□□□□ 0.4
ELL3Q9HB65 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.53■□□□□ 0.4
ELL3Q9HB65 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ELL3Q9HB65 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ELL3Q9HB65 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ELL3Q9HB65 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ELL3Q9HB65 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.53■□□□□ 0.4
ELL3Q9HB65 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.53■□□□□ 0.4
ELL3Q9HB65 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.53■□□□□ 0.4
ELL3Q9HB65 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ELL3Q9HB65 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.52■□□□□ 0.4
ELL3Q9HB65 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ELL3Q9HB65 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ELL3Q9HB65 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ELL3Q9HB65 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.52■□□□□ 0.4
ELL3Q9HB65 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ELL3Q9HB65 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
ELL3Q9HB65 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.52■□□□□ 0.4
ELL3Q9HB65 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.52■□□□□ 0.4
ELL3Q9HB65 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.52■□□□□ 0.4
ELL3Q9HB65 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ELL3Q9HB65 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.52■□□□□ 0.4
ELL3Q9HB65 AC138907.5-202ENST00000569484 235 ntBASIC17.52■□□□□ 0.4
ELL3Q9HB65 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.52■□□□□ 0.4
ELL3Q9HB65 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.52■□□□□ 0.4
ELL3Q9HB65 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ELL3Q9HB65 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ELL3Q9HB65 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.52■□□□□ 0.4
ELL3Q9HB65 KRT16P2-201ENST00000414673 1423 ntBASIC17.52■□□□□ 0.4
ELL3Q9HB65 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ELL3Q9HB65 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.52■□□□□ 0.4
ELL3Q9HB65 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ELL3Q9HB65 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ELL3Q9HB65 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ELL3Q9HB65 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
ELL3Q9HB65 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ELL3Q9HB65 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ELL3Q9HB65 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ELL3Q9HB65 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.51■□□□□ 0.39
ELL3Q9HB65 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ELL3Q9HB65 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ELL3Q9HB65 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ELL3Q9HB65 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ELL3Q9HB65 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms