Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF408Q9H9D4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF408Q9H9D4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF408Q9H9D4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF408Q9H9D4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF408Q9H9D4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF408Q9H9D4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF408Q9H9D4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.82■■□□□ 1.4
ZNF408Q9H9D4 AC022616.7-201ENST00000525383 220 ntBASIC23.82■■□□□ 1.4
ZNF408Q9H9D4 KRT126P-201ENST00000549467 1181 ntBASIC23.82■■□□□ 1.4
ZNF408Q9H9D4 AC027702.1-201ENST00000563810 1770 ntBASIC23.82■■□□□ 1.4
ZNF408Q9H9D4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.82■■□□□ 1.4
ZNF408Q9H9D4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF408Q9H9D4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 AC023632.3-201ENST00000521633 145 ntBASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 C2orf69P3-201ENST00000565542 1120 ntBASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
ZNF408Q9H9D4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 CRYGFP-201ENST00000418459 633 ntBASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
ZNF408Q9H9D4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.79■■□□□ 1.4
ZNF408Q9H9D4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 LINC01238-205ENST00000567549 1107 ntBASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF408Q9H9D4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF408Q9H9D4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF408Q9H9D4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF408Q9H9D4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
ZNF408Q9H9D4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.77■■□□□ 1.4
ZNF408Q9H9D4 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.77■■□□□ 1.4
ZNF408Q9H9D4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC23.77■■□□□ 1.4
ZNF408Q9H9D4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
ZNF408Q9H9D4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.77■■□□□ 1.4
ZNF408Q9H9D4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
ZNF408Q9H9D4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF408Q9H9D4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms