Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATPAF2Q8N5M1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATPAF2Q8N5M1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 AL109923.1-201ENST00000618799 583 ntBASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATPAF2Q8N5M1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATPAF2Q8N5M1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATPAF2Q8N5M1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.66■□□□□ 0.9
ATPAF2Q8N5M1 C2orf69P4-201ENST00000565394 541 ntBASIC20.66■□□□□ 0.9
ATPAF2Q8N5M1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.66■□□□□ 0.9
ATPAF2Q8N5M1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATPAF2Q8N5M1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATPAF2Q8N5M1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATPAF2Q8N5M1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATPAF2Q8N5M1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATPAF2Q8N5M1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATPAF2Q8N5M1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 AC092118.2-201ENST00000613495 667 ntBASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ATPAF2Q8N5M1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATPAF2Q8N5M1 AL162377.1-201ENST00000618844 1793 ntBASIC20.64■□□□□ 0.9
ATPAF2Q8N5M1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATPAF2Q8N5M1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATPAF2Q8N5M1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATPAF2Q8N5M1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ATPAF2Q8N5M1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
ATPAF2Q8N5M1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATPAF2Q8N5M1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATPAF2Q8N5M1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATPAF2Q8N5M1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATPAF2Q8N5M1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.63■□□□□ 0.89
ATPAF2Q8N5M1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ATPAF2Q8N5M1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.63■□□□□ 0.89
ATPAF2Q8N5M1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.63■□□□□ 0.89
ATPAF2Q8N5M1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATPAF2Q8N5M1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATPAF2Q8N5M1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATPAF2Q8N5M1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms