Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LYSMD2Q8IV50 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.71■□□□□ 0.42
LYSMD2Q8IV50 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD2Q8IV50 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD2Q8IV50 AC104581.1-202ENST00000635932 2618 ntBASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 OR2I1P-207ENST00000453522 948 ntBASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.68■□□□□ 0.42
LYSMD2Q8IV50 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 AC009113.1-201ENST00000570267 2443 ntBASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 LINC01465-201ENST00000408887 1940 ntBASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 AC135050.7-201ENST00000624508 2218 ntBASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD2Q8IV50 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 MIR3181-201ENST00000578512 73 ntBASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 AC099791.2-201ENST00000605725 427 ntBASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms