Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC093503.3-201ENST00000624917 2352 ntBASIC17.31■□□□□ 0.36
AP3S2P59780 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 Z82202.1-201ENST00000623446 1880 ntBASIC17.31■□□□□ 0.36
AP3S2P59780 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.3■□□□□ 0.36
AP3S2P59780 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.3■□□□□ 0.36
AP3S2P59780 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.3■□□□□ 0.36
AP3S2P59780 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
AP3S2P59780 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.3■□□□□ 0.36
AP3S2P59780 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
AP3S2P59780 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.3■□□□□ 0.36
AP3S2P59780 HSD17B1P1-201ENST00000590052 955 ntBASIC17.3■□□□□ 0.36
AP3S2P59780 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AP3S2P59780 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
AP3S2P59780 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3S2P59780 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
AP3S2P59780 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.3■□□□□ 0.36
AP3S2P59780 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S2P59780 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP3S2P59780 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3S2P59780 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
AP3S2P59780 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3S2P59780 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 AC092171.4-201ENST00000609130 632 ntBASIC17.29■□□□□ 0.36
AP3S2P59780 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3S2P59780 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3S2P59780 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
AP3S2P59780 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.29■□□□□ 0.36
AP3S2P59780 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3S2P59780 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S2P59780 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3S2P59780 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3S2P59780 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AP3S2P59780 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3S2P59780 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3S2P59780 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3S2P59780 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3S2P59780 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3S2P59780 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.28■□□□□ 0.36
AP3S2P59780 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3S2P59780 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
AP3S2P59780 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3S2P59780 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3S2P59780 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
AP3S2P59780 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
AP3S2P59780 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S2P59780 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S2P59780 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S2P59780 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S2P59780 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S2P59780 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S2P59780 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
AP3S2P59780 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S2P59780 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms