Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AC092171.4-201ENST00000609130 632 ntBASIC15.11■□□□□ 0.01
FOXA3P55318 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXA3P55318 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXA3P55318 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXA3P55318 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
FOXA3P55318 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXA3P55318 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXA3P55318 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXA3P55318 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
FOXA3P55318 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXA3P55318 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXA3P55318 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXA3P55318 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
FOXA3P55318 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
FOXA3P55318 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXA3P55318 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXA3P55318 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
FOXA3P55318 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXA3P55318 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXA3P55318 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXA3P55318 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXA3P55318 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXA3P55318 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXA3P55318 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
FOXA3P55318 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXA3P55318 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXA3P55318 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 AC239859.2-201ENST00000444165 318 ntBASIC15.1■□□□□ 0.01
FOXA3P55318 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXA3P55318 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
FOXA3P55318 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
FOXA3P55318 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
FOXA3P55318 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXA3P55318 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXA3P55318 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXA3P55318 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXA3P55318 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
FOXA3P55318 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXA3P55318 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXA3P55318 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXA3P55318 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXA3P55318 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
FOXA3P55318 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXA3P55318 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
FOXA3P55318 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXA3P55318 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXA3P55318 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXA3P55318 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.08■□□□□ 0.01
FOXA3P55318 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXA3P55318 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
FOXA3P55318 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
FOXA3P55318 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXA3P55318 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXA3P55318 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.08■□□□□ 0.01
FOXA3P55318 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
FOXA3P55318 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FOXA3P55318 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.08■□□□□ 0
FOXA3P55318 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FOXA3P55318 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FOXA3P55318 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.08■□□□□ 0
FOXA3P55318 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.08■□□□□ 0
FOXA3P55318 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
FOXA3P55318 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms