Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
MECP2P51608 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.17■□□□□ 0.34
MECP2P51608 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
MECP2P51608 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MECP2P51608 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MECP2P51608 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
MECP2P51608 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MECP2P51608 Z82202.1-201ENST00000623446 1880 ntBASIC17.16■□□□□ 0.34
MECP2P51608 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MECP2P51608 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.16■□□□□ 0.34
MECP2P51608 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.16■□□□□ 0.34
MECP2P51608 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.16■□□□□ 0.34
MECP2P51608 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MECP2P51608 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MECP2P51608 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MECP2P51608 AL136116.3-201ENST00000402907 1138 ntBASIC17.16■□□□□ 0.34
MECP2P51608 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.16■□□□□ 0.34
MECP2P51608 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MECP2P51608 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MECP2P51608 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
MECP2P51608 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MECP2P51608 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.16■□□□□ 0.34
MECP2P51608 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
MECP2P51608 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.15■□□□□ 0.34
MECP2P51608 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.15■□□□□ 0.34
MECP2P51608 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
MECP2P51608 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.15■□□□□ 0.34
MECP2P51608 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.15■□□□□ 0.34
MECP2P51608 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.15■□□□□ 0.34
MECP2P51608 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MECP2P51608 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.15■□□□□ 0.34
MECP2P51608 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.14■□□□□ 0.33
MECP2P51608 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
MECP2P51608 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
MECP2P51608 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.14■□□□□ 0.33
MECP2P51608 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.14■□□□□ 0.33
MECP2P51608 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.14■□□□□ 0.33
MECP2P51608 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
MECP2P51608 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.14■□□□□ 0.33
MECP2P51608 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MECP2P51608 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.14■□□□□ 0.33
MECP2P51608 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
MECP2P51608 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
MECP2P51608 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MECP2P51608 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.13■□□□□ 0.33
MECP2P51608 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
MECP2P51608 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.13■□□□□ 0.33
MECP2P51608 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
MECP2P51608 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MECP2P51608 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.13■□□□□ 0.33
MECP2P51608 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MECP2P51608 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MECP2P51608 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MECP2P51608 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MECP2P51608 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MECP2P51608 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MECP2P51608 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.13■□□□□ 0.33
MECP2P51608 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
MECP2P51608 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.13■□□□□ 0.33
MECP2P51608 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MECP2P51608 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
MECP2P51608 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MECP2P51608 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MECP2P51608 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.13■□□□□ 0.33
MECP2P51608 TREX1-205ENST00000625293 1783 ntBASIC17.12■□□□□ 0.33
MECP2P51608 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MECP2P51608 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MECP2P51608 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MECP2P51608 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MECP2P51608 AL138781.2-201ENST00000617896 1843 ntBASIC17.12■□□□□ 0.33
MECP2P51608 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms