Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 TSPY26P-201ENST00000476365 1326 ntBASIC13.64□□□□□ -0.23
SMIM1B2RUZ4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 AL356441.2-201ENST00000443009 864 ntBASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 KRT16P2-201ENST00000414673 1423 ntBASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM1B2RUZ4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SMIM1B2RUZ4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM1B2RUZ4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM1B2RUZ4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM1B2RUZ4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM1B2RUZ4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM1B2RUZ4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM1B2RUZ4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM1B2RUZ4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms