Protein–RNA interactions for Protein: A6NHR8

FAM47DP, Putative protein FAM47D, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DPA6NHR8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM47DPA6NHR8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 AC020907.5-201ENST00000624372 1936 ntBASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
FAM47DPA6NHR8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM47DPA6NHR8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 RARRES2P4-201ENST00000514074 484 ntBASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 AC092118.2-201ENST00000613495 667 ntBASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 AC121338.2-201ENST00000622535 1744 ntBASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.92■□□□□ 0.94
FAM47DPA6NHR8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 AC007225.1-201ENST00000566331 1836 ntBASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 AC010980.2-201ENST00000587099 1412 ntBASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 AC243732.1-201ENST00000612648 864 ntBASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
FAM47DPA6NHR8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM47DPA6NHR8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
FAM47DPA6NHR8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
FAM47DPA6NHR8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms