Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 AL033527.3-201ENST00000566366 1196 ntBASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 AC074183.2-201ENST00000623112 922 ntBASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RBFOX3A6NFN3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 TSPY13P-201ENST00000338964 914 ntBASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RBFOX3A6NFN3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RBFOX3A6NFN3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms