Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 AC133552.2-202ENST00000575694 574 ntBASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 OR10C1-204ENST00000622521 1039 ntBASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.79■□□□□ 0.92
PHTF1Q9UMS5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF1Q9UMS5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 NCF1B-203ENST00000435988 1254 ntBASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 RARRES2P4-201ENST00000514074 484 ntBASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 AC016405.3-201ENST00000607710 860 ntBASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 AL121832.2-201ENST00000610979 668 ntBASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF1Q9UMS5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PHTF1Q9UMS5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.77■□□□□ 0.91
PHTF1Q9UMS5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PHTF1Q9UMS5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 AF201337.1-201ENST00000520239 748 ntBASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PHTF1Q9UMS5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms